Brachypodium distachyon (stiff brome): 100834728
Help
Entry
100834728 CDS
T01717
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100834728
Membrane trafficking [BR:
bdi04131
]
Protein recycling
Others
EARP complex
100834728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
100834728
NCBI-ProteinID:
XP_003574292
UniProt:
A0A0Q3LZM6
LinkDB
All DBs
Position
3:34839865..34849160
Genome browser
AA seq
1080 aa
AA seq
DB search
MRSDAPPPTAPSASSSSSSPSLFGGGELFESGAPSPLVFLPLLLIQGGGMDLSRVGERLL
GSVRSARSLGLLPPTPSSAPPRPEVPARAAAAAAAARAIAGLPPHERINLPSNSEDLVSI
YGSNPQGPAVDELEEVFYEEEFDPIKFILANISEEGSDASYFDKQSTLRLAQLDKIAERL
SHHVMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHISSSKNEVSRDLVVNVKSKKKQ
ALLDVLPVLTELRHAQDMQLELETYVEKENYFQAFQLLPEYLQILENYSGLSAVQEMGRG
IEAWLARTIQKLDIRLLGVCQTFSEESYLTVIDAFALMGDIVGMAEKMQSFFLQEVLSQT
HFVLKEMLEEEVGNNTQRNRFTYSDLCVQVPESKLRPCLLKTLESIFSLMRSYFAIMSFC
PDEKNNTSQSPSKTSADSGKVHSSAVVNQDGFAAEKSDRTSSSDVNNPDTSTSGTDAPFY
QLRADATKLVAYTFERGRRNLWQLATSRLSVLLSSSAVCSTSTYQFLKNYEDLTIFILAG
EAFCGFEASEFRQKLKTVCLNYVVTFHRQNIYALKMVLEKESWTIMCAEASQIISLAGLT
GDGAALISPTSRSSTLPTCFRGNISVSNIGRQKNGFASWFEIENPFFFKLENGSTESPKS
NALFNSSVGNNPVHGSHGNGNNSPFDEENEDLLADFIDEDSQLPSRILKTKTVKGNSSYW
KDGDISSQTGSSLSLLRMMDKYARLMQKLEMVNVELFKGIFQLFGIFYLHIYETFGYQDR
SQSGKPLLDSQSFRLKAALSKITQDSDQWIKPQNSLYAPSSPLSINSTITHMDVMPTAPP
SSMFTSYGLKERCAAAETVSLVARVLNRSRSHLHSVLSQNNTSVVEEFFGTLVDTVPDLA
EHIHRTSARMLLHINGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYKTRLDHGGISK
ELQQLLLEYGIESIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVSSNVKPKLQ
IVDTFVKAYYLPETEYVHWARSHPEYSKTQVVGLVNLVATMKGWKRKTRTETIERIEAGP
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcgacgcgccgccgcccaccgcgccctcggcctcgtcctcctcctcctctccg
tctctcttcggcggcggcgagctctttgagtcgggggccccctcgcccctcgttttcctg
cccctgctcctgatccagggcggcggcatggacctctcccgcgtcggcgagaggctcctc
ggctccgtccgctccgcgcgctccctcggcctccttcccccgaccccttcctcggcccct
ccccgccccgaggttccagctcgagctgctgctgccgcggctgctgcacgtgcaatcgcc
ggtttgccgccacacgagaggatcaacctgccgtccaattcggaggacctggtctcgatc
tacgggagcaacccgcaggggcctgccgtggatgagcttgaggaggttttctatgaggag
gagtttgacccgataaagttcattttggcaaatatttccgaagaaggcagcgatgcctcc
tattttgataagcagtctactttgaggttagcacagcttgacaagattgcagaacggtta
tcacatcatgttatgggtcaccatgaagaaatggtgaaggggatgcagttggtgatggag
ttagaacaagacttaaaggttgcgaatgtaatctgcatgaatggtcgaaggcacatatcc
tcctccaagaatgaggtgtcaagggatctggttgtcaatgtaaaatcaaagaagaaacaa
gctttgctggatgttcttcctgttcttacagaacttcgacatgctcaagatatgcagttg
gagcttgaaacttatgttgagaaggaaaattactttcaggcatttcaattattgccagag
tatttgcaaatcctggagaattattcaggactttctgctgtacaagaaatgggacgaggg
attgaggcatggttagcacggacaatccaaaaattggacatccgtttgcttggagtttgt
caaacattcagtgaagaaagctatctaaccgtgattgatgcattcgcactgatgggtgac
attgttggcatggctgaaaagatgcagagtttctttttgcaagaagtactctctcagaca
cattttgtcctgaaagaaatgttggaagaggaggtgggaaataatacgcagagaaataga
tttacatatagtgatctgtgtgttcaagttcctgagtccaaacttcgcccctgcttgtta
aaaactcttgagagcatattttcattgatgcgatcttattttgctatcatgagcttttgc
ccagatgaaaagaataacacatctcagagtccaagcaaaacttcagctgattcaggaaaa
gttcattcaagtgcagtagtcaatcaggatggttttgcagccgaaaagagtgacagaaca
tcatcttctgatgtcaacaatcctgatactagcacatcaggaactgatgctccattctat
caactgagagcagatgctacaaaacttgttgcatatacatttgaaagggggcggagaaat
ctctggcaattggcaacaagtcgcttgtctgttttactgtcttcttcagctgtttgttca
actagcacataccaatttctgaagaactatgaagatctcaccatattcattttggctggt
gaagcattttgtgggtttgaagctagtgagttccggcagaagttgaagactgtctgtttg
aactacgtagtgacctttcaccggcaaaatatatatgcacttaaaatggtactggaaaag
gaatcttggacaataatgtgtgctgaagcttcacaaataattagtttagcaggacttact
ggtgatggtgctgcgctgatttcgcctaccagccgtagttccaccttgccaacatgtttc
cgtggaaatatttctgtgtctaatatagggaggcaaaagaatggatttgcttcctggttt
gagattgaaaaccctttttttttcaagttagagaatggctccacagaatcccccaagtct
aatgcgctgttcaactcatcagttggcaataatcctgtccatggtagtcatggtaatgga
aataattcaccttttgatgaagagaatgaggaccttctcgctgatttcattgatgaagat
agccaattgcccagtaggatcttgaaaacaaaaaccgttaaaggcaattcttcatattgg
aaagatggagacatttcatcgcagacaggatcatcactttctttattaaggatgatggat
aaatatgcccgacttatgcaaaagctggaaatggtcaatgttgagctttttaagggcatt
ttccaactttttggcattttttatctccacatatacgagacatttgggtaccaggacagg
agtcaaagtggcaagccgttacttgattcccaatcatttcggcttaaagctgctttatca
aaaataacacaagactccgatcagtggatcaaaccacagaacagtctgtatgcaccgtca
tcacctttatcaataaattcgactatcactcatatggatgtgatgcctactgcgcctcca
agttcaatgttcacctcctatgggttaaaggagaggtgtgcagctgccgaaacagtatca
ttggttgctcgagttttgaacagatctaggtctcatctacattcagtgttgtctcaaaat
aacacttctgttgttgaagagttttttggcacactggtggacactgttccagatttggct
gagcacattcacaggacaagtgcacggatgcttttgcatatcaatgggtatccagataaa
atagcaaatgccaaatgggaggtcaaggagcttggaatagagcacaatggatacgttgat
ttgttattgggtgagttcaaacattacaagacaagattggaccatggaggaatttccaag
gagctccaacaactcttgctggagtatggcatagagagcatcgcagaagttttagtggaa
ggactctctagagtaaagcggtgcactgatgaaggacgtgccttgatgtcacttgacctt
caggtactaattaatggtctgcaacacattgtatcatcgaatgttaagccgaagctgcaa
attgtggatacttttgtaaaggcttattatttgccggagacggagtatgttcactgggca
cgatctcatccagagtacagcaagactcaggtcgtcgggttggttaacctggttgccacc
atgaaaggatggaaaaggaaaacgaggacagaaaccattgagaggattgaggcgggacca
tag
DBGET
integrated database retrieval system
