Brachypodium distachyon (stiff brome): 100834773
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Entry
100834773 CDS
T01717
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100834773
03036 Chromosome and associated proteins [BR:
bdi03036
]
100834773
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100834773
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100834773
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100834773
microRNA pathway
RISC loading complex
100834773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL2
ArgoL1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100834773
NCBI-ProteinID:
XP_010227268
LinkDB
All DBs
Position
5:24479825..24484611
Genome browser
AA seq
1071 aa
AA seq
DB search
MEHEQGGGRGRGKARGGGGRGGGRGGGYGPQGGGGGYGRGEGQGRGGGGGYAPRGRGYGP
QGGGEGRGGGGYGYQGRGGGGYGSQGGGEGRGRGYGPQGRGEGRGGGYGAHGRGEGRGGG
YGAQGRGEGLGAGGGHGPQGSGGHDGGRGTGGGGRGYGPGGGSAWAQPGRGRGGGGGGGA
VPAWGPAPAPAPAPEARRIKAEEAGSSSGSVERISDKVAKIEPSAPQVVVSPNGTRVPMQ
RPDRGGSSFRNQVQLLVNYFIVNYQNVSTIFHYDIDIKFDQSSSESSGKELSNADFHSAK
AELFKDDSFRNLSSAVAYDGKRNLFTCTELPEGLFRVRVRSRTYIVSVEFKKRLPLNQHP
QLPREVLQGLDVVVREDSRLHNIMLGXGFYSRDRITNLGQDVVAMKGTKQTLKHTQQGLV
LCVDHSVMPFRKAGPVLDVVRQFIRRNLDYRTNLTDSEWDNLSSELKGQRVTVNHRMTNQ
KYTIRGLTKDPARMITFEDSESGQQKRLVDYFAQQYGKVTEYEMLPCLDLSKTKKNYVPI
ELCDFLEGQRYPKANLPRNIDTSLKRMALIGVDERKAEIMMSVGATHGPCRGEIAEKFGV
SLDVKMTEVTGRILPPPVLKLGGPKGQTCKFNINQPTCQWNLMRNKLVEGKALNYWGIID
FSTDSRQPLHREMFLNYIVGKCREXGIQMAEKPCYQYSSEMAVLWDADELYRVLNEAKQS
AEEKKQKLQLLFCPMFEQHPGYKTLKLICETKLGIQTQCFLSNVANNPRGQDQYMSNLAL
KINSKIGGSNVQLFDLLPRDTGAPFMLIGADVNHPSPGNLESPSIAAVVASMDKGATKYA
SRIRAQPHRCEVIKHLGEICQELISVFENKNKVKPHKIIYFRDGVSDGQFDMVLNEELAD
MEKRIKVNGYSPTITVIVAKKRHHTRLFPKDKQAGKGNVLPGTVVDTKVVDPSAYDFYLC
SHNGLIGTSRPTHYYSLMDEHNYSSDDLQKLIYNLCFVFARCTKPVSLATPVYYADLAAY
RGRLYYEGMTMAFPTQERGSSSSSSSSAAAPAPAPEFPRLHEDIQNNMFFI
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgagcaaggcggcggccgcggccgcgggaaagctcgcggcggaggcgggcgt
ggcggtgggcgagggggtggctacgggcctcaaggaggcggcggaggctacggacgaggt
gagggccagggccgtggaggcggaggcggctacgcgcctcgcgggagaggctacggccct
cagggaggcggcgagggccgcggcggaggaggctacgggtaccagggccgcggcggagga
ggctacggctctcagggaggcggcgagggccgcggaagaggctacgggcctcaggggcgc
ggcgagggacggggaggaggctatggcgcccatgggcgcggcgagggaaggggtggaggc
tatggcgctcaggggcgcggcgagggccttggagccggaggaggccacgggcctcaggga
agcggagggcacgatggtgggcgtggtactggcggtggtggacgtgggtacgggccaggc
ggcggcagcgcgtgggcgcagccggggagagggcgtggaggtggaggtggaggtggagcg
gtcccggcgtgggggccggcgccagcgccagctccagccccggaagcgaggaggatcaaa
gcagaggaggcggggagctcgtctggatccgtcgaacgcatatccgacaaagtggcaaaa
atagaaccatcagcaccccaagttgttgtgtctcctaatggcacacgggtgccaatgcaa
agacctgatcgtggaggatcatcatttcgaaaccaggtccaacttttggtgaactacttc
atagtcaactaccaaaatgtgtcaaccatatttcactacgacatagacatcaagtttgat
caatcatcttcagagtcttcaggcaaggagctctccaatgcagattttcattctgcaaag
gccgagcttttcaaggatgacagctttcggaatctttcatcagctgttgcttatgatgga
aagagaaatctatttacttgcactgaactgccagaaggcttattccgtgtgagagttcgt
tcacggacctacattgtatcagtagagttcaagaagcggcttcctttaaaccaacaccca
caattgcctagggaggtcttgcagggtcttgatgtcgtcgtgcgcgaggattcaaggctg
cacaatataatgcttggcnagggattttactcacgggacaggattactaatctcgggcag
gatgttgtagctatgaaaggaaccaaacagacccttaaacacacccagcaagggctggtc
ctatgtgttgaccattcagttatgccattccgcaaagctggacctgtcctggatgttgtc
aggcagttcataagaaggaaccttgactacaggacaaatctgaccgacagtgaatgggat
aatttgtcatctgaactgaaaggccaacgagttactgtgaaccaccggatgactaaccag
aagtacactattcgaggcttaacaaaggaccctgccagaatgatcacctttgaagattct
gaatcagggcagcaaaagaggcttgttgattattttgctcagcagtatggcaaggtgact
gagtatgagatgcttccatgcttggatttgtccaagacgaaaaagaactatgtgccgatt
gagctttgtgatttccttgaaggacagaggtatccaaaggcaaatttgccaaggaatatt
gatacaagcctgaaaaggatggctttaatcggtgtagatgaacggaaggcagagattatg
atgtcggtaggagctacacatgggccttgcaggggagagatagctgagaagttcggggtg
tctttggatgtaaagatgacagaagtcaccggtaggatccttcctcctccagtcctgaaa
cttggcggccccaaaggccagacttgcaaattcaatatcaatcagcctacctgccaatgg
aacctcatgaggaataaactggtagaaggcaaggccctcaattactggggcattatcgac
ttcagtacagattccaggcagccgcttcaccgagaaatgtttcttaattatatcgttggc
aagtgccgtgagnttggcattcagatggctgagaagccatgctatcagtattcctcagaa
atggcagtgctatgggatgcagacgaattatacagggtgctgaacgaagcaaagcagtct
gcagaagaaaagaagcaaaagctgcagctgctcttctgcccgatgtttgagcagcatccg
gggtacaagacactgaagctgatctgcgagacgaaactggggatccagacccagtgtttc
ttgagcaacgtcgcgaacaatccccggggccaggaccagtacatgtccaaccttgctctc
aaaatcaacagcaagatcggtgggagcaacgtccagctctttgatctgctcccaagggac
acgggcgctcctttcatgctcatcggcgcggacgtgaaccacccgtcgcccggtaatctg
gagagcccgtctatagcagccgtggtggcgtccatggacaaaggagccaccaagtatgcg
tccaggattcgcgcgcagccacaccgctgcgaggtgatcaagcacctcggcgagatctgc
caagagctcatcagtgtctttgagaacaagaacaaggtcaagccacataagatcatttac
ttccgcgatggcgtgagcgatgggcagttcgacatggtcctgaatgaggagctggcggac
atggagaagaggatcaaggtgaacggctactcgccgacgatcaccgtcatcgtggccaag
aagcggcaccacacgcggctgttccccaaggataagcaggcgggtaagggcaacgtgctc
cctggcacggtggtggacaccaaagtggtcgacccctcggcatacgacttctacctgtgc
agccacaacgggctgatcgggacgagccggccgacgcactactacagcctcatggacgag
cataactacagctcggacgacctccaaaagctgatctacaacctctgcttcgtcttcgcc
cgctgcaccaagcctgtgtcgctggccacgcccgtctactatgccgacctggcggcgtac
cgcggcaggctctactacgagggcatgacgatggcgttcccgacccaggagcgtgggtct
tcatcctcgtcctcttcctccgcagctgctcctgctcctgctccagagttcccgaggctg
cacgaggatattcagaacaacatgttcttcatctga
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