Brachypodium distachyon (stiff brome): 100834834
Help
Entry
100834834 CDS
T01717
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100834834
04121 Ubiquitin system [BR:
bdi04121
]
100834834
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100834834
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100834834
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100834834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Zf_IFT144_1st
DUF7129
Zn_ribbon_6
zf-RING_16
DUF7410
HypA
DUF8054_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
100834834
NCBI-ProteinID:
XP_003557912
UniProt:
I1H5F8
LinkDB
All DBs
Position
1:61819915..61821771
Genome browser
AA seq
288 aa
AA seq
DB search
MSGGRQSYWCFQCRQRVRPRGREMECPYCDSGFVAEMDDVDAVMSQFVGMDTDFHRDPRF
GIMEAMSAVMRHGMGGMNRDVDVRGRPSILTDLEMEFGSGPWLLFRGQLPGHLSEDNGFD
VIVNGRRGVGMRRANIADYFVGPGLDDLIEQLTHNDRRGPPPASQSSIDAMPTVKITPRH
LTGDSHCPVCKDKFELGSEAREMPCKHLYHSDCILPWLEQHNSCPVCRYELPTQGSTGAS
CSRSRSTNQNHNSSSSSNSGRAGVRQRRRNPFSFLWPFRSSSSSSSSR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggtaggcaatcatactggtgcttccagtgtagacagcgggttaggcctcgt
ggccgggagatggagtgtccctactgtgattctggttttgtggctgaaatggatgatgtg
gatgctgtcatgagccaatttgttgggatggatactgatttccatcgcgatccaaggttc
gggatcatggaggcaatgtctgccgtgatgcgacatggtatgggtgggatgaatcgagat
gtggatgtaagaggaaggccaagcatattaactgacctggagatggagtttggctcaggg
ccatggttgctcttccgtggtcagctccccggtcatctctcagaggacaatggtttcgat
gtgattgtcaatggacgccgtggtgttggcatgcggagggcaaacattgcagattacttt
gttggacctggattggatgatctaattgagcagttgactcataatgatcgtcgagggcca
ccacctgcctctcagtcctcgattgatgccatgcctactgttaagatcacaccgaggcat
ctcactggcgactcgcactgcccggtctgcaaggacaaatttgagctgggatcagaagca
agagagatgccatgcaagcatctatatcactctgattgcatacttccttggctagagcaa
cacaattcctgccctgtttgccgatatgagctgccaacacagggctctactggcgctagc
tgctcgcgatcaagatcaaccaaccaaaatcacaattcaagtagttcaagtaacagtggg
agagccggtgtgcgtcagaggagaaggaaccctttctcgttcctgtggcctttccgctca
tcaagttcaagctctagttctcgttag
DBGET
integrated database retrieval system
