Brachypodium distachyon (stiff brome): 100834912
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Entry
100834912 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase hel2
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100834912
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100834912
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100834912
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
100834912
NCBI-ProteinID:
XP_003568705
UniProt:
I1HKP9
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Position
2:complement(31114279..31119579)
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AA seq
851 aa
AA seq
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MDDSCAVCAEALEWVAYGPCGHREVCSTCIIRIRFVLEDPRCCICKTESDTVFVTKAMGD
YTRVITDFSVFPSGANEGKVGEYWYHEDTKAYFDDADHYKMIRAMCRLSCSVCEKAEDQV
GQAAQAKRRSRFRSIEQLKGHLFHQHRLFMCNLCLEGRKVFICEQKLYTRAQLTQHTKTG
DSEVDGSEGERSGFAGHPMCEFCRNAFYGDNELYTHMSREHFSCHICQRQHPGQYDYFRN
YDDLEMHFRKDHFLCEDEACLAKKFTVFQSESEFKRHNAMEHGGRMSRAQRNAALQIPTS
FIYQRNEQDQRRGRGRGRSAHGRPDRDISFALWDGSATVDHGLGNRVDSVTGPLHSLSVS
SNSGRAETGRSTGNDRVLEQLSFPPLQDQDIPDARMDSVPDETSFPPLSEQPSRYALAVN
QSSRGSARLGDESLFPPLPGSSNNRGAASTQQGLQNLAKNTLASRLQQRSMGTVKVLNSS
RPRPSENPEIVPHVSSSTQTWPPPDQGLLSGSSQLRMGSTRENGLTPPASSSSAWKLGGS
NKMTHSVSTLNLVSGASFGQTSSSTPYANKNQLPPQISQTSPIVEDVRAANKSLVDRMRA
ALGMDADRYAAFREIAGEYRQGAIDTPEYLSYVEQFGISHLVPEMARLLPDPWKQKELLD
AYYTNMRFRSLNENGTGETSTLKENKPKKKGKGKTHDVSETIDAKDASNSLADSFLETVR
KHQSNNKAQEGEAVVLSKDGYRSSKGKTPLLAGGSSSSTDMGLDGDPGAVSDVVKGGKGS
SSNSSRQSKKTSKFLRARLGDSSLAMLDFSRRDVSPERPEQESQGPHTGLPVRSVWKNGA
AQKLFSGNGKK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagctgcgcggtgtgcgcggaggcgctggagtgggtcgcttacgggccatgc
gggcatcgcgaggtgtgctcgacctgcatcatccgcattcgcttcgtgctcgaggaccct
cgatgctgcatctgcaagaccgaatcggacaccgtctttgtcacgaaggccatgggcgat
tacacaagagtgatcaccgatttctctgtttttccctctggggcgaacgaggggaaggtg
ggggaatactggtaccatgaggatacaaaggcatactttgatgatgctgatcattataaa
atgataagggcaatgtgccggctttcttgtagtgtatgtgagaaagctgaggatcaggtt
ggtcaggcagcacaagcaaagcgcagaagcaggttcaggagcattgaacagctaaaggga
catctgtttcatcagcacaggttattcatgtgcaacctttgcttggaggggagaaaggta
ttcatttgtgagcagaagctttatacaagggcacagttaactcagcatacaaaaactggt
gactctgaggtggacgggtctgagggtgaacgcagtggttttgcaggacacccaatgtgt
gaattttgcagaaatgcattttatggagacaatgagctttacacacatatgtccagagaa
cacttttcgtgccacatatgtcaaaggcagcatcctggacagtacgattatttccgtaat
tatgatgatttagagatgcattttcgtaaggatcattttctatgtgaagatgaagcatgt
ttggcaaagaagtttaccgtcttccagagtgaatcagagttcaagagacataatgctatg
gagcatggagggcgaatgtctcgtgctcagaggaatgctgcacttcagatacctaccagt
tttatatatcaaaggaatgagcaggatcaaaggcgtggcagaggtaggggccgtagtgct
cacggcagacctgatagggatatctcatttgctctgtgggatggcagtgcaactgtggac
catggccttggaaatcgagttgatagtgtgacagggcccttgcattcattaagtgtcagt
tctaattctgggcgagcagaaactggccgaagcactgggaatgatcgtgtactcgaacag
ttgtcttttcctccacttcaagaccaggatatccctgatgctaggatggactctgttcct
gacgaaacttcctttcctcccctttcggagcagccatcaaggtatgctctggccgttaat
cagagttcaaggggttctgcgaggcttggtgacgaatcattattccctccattaccgggg
tcgagtaacaacaggggtgctgcttcaacgcaacagggactacaaaatctcgctaagaac
acacttgcttcaaggcttcaacaacgtagtatgggcactgtgaaagtactcaattcttct
cggcctcgcccctctgaaaatcctgaaatagtacctcatgtttcaagttcgacccagaca
tggcctccacctgatcaggggctactctctggttcttctcaacttcggatgggatcaaca
agagaaaatgggctcacgccacctgcctccagcagttcagcatggaagcttggaggttca
aacaagatgacacactctgtttctacccttaatcttgtttctggtgcgtcctttggccag
acatcatcaagtacaccttacgccaataaaaaccaactgccaccacaaatcagccaaact
tcgcctattgtggaggatgttcgtgccgccaataaatccctggttgacagaatgcgtgct
gctttaggaatggatgcggataggtacgctgcatttagagaaattgctggcgaataccgc
caaggtgccattgatactccagagtatctttcctatgttgagcaatttggtatatcacat
cttgtccctgaaatggctaggttgttacctgatccttggaagcagaaggaacttcttgat
gcctattacaccaatatgcgctttagaagcctcaacgaaaatggcactggtgaaaccagt
acgttgaaagagaacaagcctaaaaagaaggggaagggaaaaactcatgatgtctcagaa
acgattgatgccaaggatgcaagtaattcgctagcagatagttttttggaaactgtgagg
aagcatcaatcaaataacaaggctcaggaaggagaggctgtggtgctttccaaagatggg
tatcgatcttccaagggaaagaccccactattagctggcgggtcatcatctagtacagat
atgggtctagatggtgatcctggtgccgtcagcgatgtggtgaagggagggaaaggcagc
agcagtaacagcagtcgacaatcaaagaaaacgtcaaagtttctcagagctcgattaggt
gatagctcactagctatgcttgactttagtcgccgtgacgtgagccctgaacgaccagaa
caggaatcgcaaggcccacacactgggttgcctgtgcgaagcgtttggaagaatggtgca
gcgcagaagctcttttctggcaatggaaagaagtaa
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