Brachypodium distachyon (stiff brome): 100834993
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Entry
100834993 CDS
T01717
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100834993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100834993
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100834993
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100834993
NCBI-ProteinID:
XP_010234089
UniProt:
I1GR86
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All DBs
Position
1:14580029..14584377
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AA seq
288 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED
AIHGRDGYNFDGNRLRVELAHGGRANSSSLPNSYGGGGGGGGRRGGVSRHTEYRVLVTGL
PSSASWQDLKDHMRKAGDVCFSEVYREGDGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFS
RAPIRVKEYAGKRSCSYSRSRSRSRSQSYSRSRSPSKSPKAKPSRRSASRSRSRSVSSHP
RSESKGRSPSRSPAKSRSPIASPANGAAASPKKRSPSRSPSPPDAKSE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcgctggagccggactatttacgtagggaacctccccggtgatatcagggag
agggaggtggaggatctcttctacaagtatggacggattgttgaaatcgacttgaaggtt
ccccctaggccacctggctttgcttttgtggagtttgaagatccccgagatgctgaagac
gcgattcatggacgggatggctataattttgatggaaatcggctgagggtcgaacttgca
catggcgggagggccaactcttcttcgcttccaaacagctacggtggtggaggtggaggt
ggaggacgccgtggcggtgtctctcggcatacagagtatcgcgttctggttactggacta
ccttcttctgcatcatggcaagatctaaaggaccatatgcgaaaggctggtgatgtctgt
ttctctgaggtgtatcgtgagggtgatgggaccactggaattgtggattatacaaactat
gatgacatgaagtatgctataaggaaacttgatgatagtgaatttagaaatgccttttcg
cgggcacctataagggtgaaagagtatgctggcaaacgcagctgctcatactcacgaagc
cgtagcagaagccggagtcagagctacagcagaagcaggagtccaagcaagtctcctaag
gcgaaaccatcacgccgttcagcatcaagatctcgatccagatcagtttcttcccatcca
cggtcagagtcaaagggacgctctccatcaagatcaccagcaaaatcccgatcccctatt
gcttctcctgccaacggtgcagcagcaagccccaagaaacgcagcccatcacgctcccca
tctcctcctgatgccaaatcagaatag
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