Brachypodium distachyon (stiff brome): 100835003
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Entry
100835003 CDS
T01717
Name
(RefSeq) beta-hexosaminidase 3
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00511
Other glycan degradation
bdi00513
Various types of N-glycan biosynthesis
bdi00520
Amino sugar and nucleotide sugar metabolism
bdi00531
Glycosaminoglycan degradation
bdi00600
Sphingolipid metabolism
bdi00603
Glycosphingolipid biosynthesis - globo and isoglobo series
bdi00604
Glycosphingolipid biosynthesis - ganglio series
bdi01100
Metabolic pathways
bdi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100835003
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
100835003
00513 Various types of N-glycan biosynthesis
100835003
00531 Glycosaminoglycan degradation
100835003
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
100835003
00604 Glycosphingolipid biosynthesis - ganglio series
100835003
00511 Other glycan degradation
100835003
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100835003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100835003
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
100835003
Chaperones and folding catalysts [BR:
bdi03110
]
Intramolecular chaperones
Others
100835003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
100835003
NCBI-ProteinID:
XP_003564819
UniProt:
I1HU57
LinkDB
All DBs
Position
2:complement(55388356..55394608)
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AA seq
521 aa
AA seq
DB search
MAQALRPLLVLLAIGSCIAADHIDLWPMPKSVTHGAQRLYVSKDATMSMVGSTYSDEKAI
LKDAFQRMLDLMKLNHNADDTNRSSFVLTGVNMVVHSPEDELSFGVDESYNLTVPTIGDP
LHAQVEAQTVYGALHALQTFGQLCYFDFTSRLIELNSAPWMITDAPRFPYRGLLIDTSRH
YLPLTTIKGVIDAMTYSKLNVLHWHIIDEQSFPIEIPSYPKLWNGSYSYSERYTMSDAVD
IVRYAEKRGVNVLAEIDVPGHALSWGVGYPSLWPSDSCKEALDVSNNFTFEVIDGILSDF
SKVFKFKFVHLGGDEVNTSCWTKTPHIKEWLNNNHMNASDAYRYFVLRSQKIAIAHGYDV
INWEETFNDFGEKLDRKTIVHNWLGGKVAPKVVAAGLRCIVSNQDKWYLDHLDATWEGFY
MNEPLKGIDNPEQQRLVIGGEVCMWGEQIDASDIEQTIWPRAAAAAERLWTPIEKLAEDP
RSATSRLSRFRCLLNQRGVAAAPLAGDGRTAPYEPGPCVRQ
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagctctgcggcccctccttgtgttgctggcaattggatcctgcatagctgct
gatcacatcgacttgtggccgatgccaaagtcggtgacccatggagcacagaggctctac
gtcagcaaagatgccacaatgtccatggtgggaagcacgtattctgatgagaaggcaatc
ttgaaggacgccttccagagaatgcttgatttaatgaaactgaaccacaatgcagacgat
acaaaccgaagttcttttgtgctcactggtgttaatatggttgttcattcaccagaggat
gagctaagcttcggggtagatgagtcatacaacttaactgttcctacaattggagatcca
ttgcatgcacaggttgaggctcaaacagtttatggagcacttcatgccttacagaccttt
ggtcaactgtgttattttgatttcacgtcaaggcttattgaactcaactcagctccgtgg
atgattactgatgcaccaagatttccttaccggggccttcttattgatacctcaaggcat
tatcttcctcttacgacaattaaaggagtgattgatgcaatgacatacagtaaattgaac
gttctccattggcatatcatagacgagcagtcatttcctattgaaataccttcataccca
aaactgtggaatggttcatattcttattcggagagatacacaatgtctgatgcagtcgac
attgtaagatatgctgaaaagcgaggtgtaaatgtgttggctgagattgacgttcctggc
catgctctatcatggggtgttggttacccatcattgtggccatcagatagctgcaaagaa
gcacttgatgtcagtaacaactttaccttcgaagttattgatggtattctttcagatttt
agcaaggtgtttaagttcaagtttgtccacttaggaggtgatgaagtcaacacaagctgc
tggaccaaaacaccccacattaaggaatggttgaataataaccacatgaatgcatcagat
gcatacagatatttcgtattaagatcccaaaagatagcgatagcacatggttacgacgtc
attaactgggaagaaacgtttaacgacttcggagaaaaattggaccgtaaaaccattgtg
cataactggcttggagggaaggtagcaccaaaagtggttgctgcagggctgagatgcata
gtaagcaaccaggataagtggtacctagatcacttggatgccacatgggaaggattttac
atgaatgaacccctcaaaggtatcgacaacccagaacagcagcgcttggttattggtggt
gaggtttgcatgtggggagagcagattgatgcatcggatattgaacaaactatttggcca
cgagctgcagcagctgcagagagattgtggactccaattgagaagcttgcagaagaccca
aggtcggccacatcaagactgtcacgcttcaggtgtttgctgaatcagagaggtgtagct
gctgcaccactagctggcgatggtcgtacagcaccatacgaacctggcccctgtgtaagg
caatag
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