Brachypodium distachyon (stiff brome): 100835140
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Entry
100835140 CDS
T01717
Name
(RefSeq) YTH domain-containing family protein 1
KO
K20102
YTH domain-containing family protein
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100835140
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100835140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
100835140
NCBI-ProteinID:
XP_010228615
UniProt:
I1GMD4
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All DBs
Position
1:4024625..4029112
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AA seq
609 aa
AA seq
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MAPAVAPAADQATDLVHKLTLDTKSEAGEGKEVKKKVSATLNGLVASPNSQVGSAEQWAN
IAPQDYKDGAMYYGAGAYPYYYGGWGDYSVYVSQDGTESYAPSAYGDMYCYPQYGHDGQN
YGSQHYQYPSTYNQPHTAASKPAYKSKTGKSGPSPQQDLSAVAAADQQSGSLDASKANSI
STDGVKGLKKVTPSLKPTGRVSSYQNHGGNTAYPWSSGNTFSEKQQKLSGGNPTSAAYNP
KTKGLLQHNSPVDPGYMSSMYSSYNGNAYGPGLWYASHLYGSPLYGGWNPLSDGKYKPRG
KTYGSGMYGFGNENLEGFNELKRGPRSGLFKNEQGLGATAVAAPKGQELPASDGSNALVQ
DQYNKADFVETYSDAKFFVIKSYSEDDVHKSIKYNVWASTPNGNKKLDSAYQAANNESSK
SPVFLFFSVNTSGQFVGLAEMVGPVDFNKTVEYWQQDKWTGCFPVKWHIVKDIPNNLLKH
IILEYNENKPVTNSRDTQEVKLEQGLQVLKIFKDHVCKTSMLDDFGFYDNREKIVQEKKA
KRQHPLEKIMNKELLTTNTGSQEVDGKLGLQELKVVGEQNAVVENGVMAVAEKSVALIDA
NPTAVANAC
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgccgtcgctcccgccgccgaccaggctacggatttggtgcacaagctgacc
ctggataccaagagcgaagctggcgagggcaaagaggtgaagaagaaggtctcggccacc
ctgaacggtttggtggcatctccaaactctcaggtggggtcagctgagcagtgggcaaat
attgcgccgcaggactacaaggacggcgccatgtattatggtgcgggtgcatacccttat
tattatggaggctggggggactattctgtgtatgtgagccaggatggaacagagtcatat
gcccctagtgcttatggggacatgtattgctatcctcaatatggtcatgatggccagaat
tacggatctcagcattaccagtacccatccacttacaaccagccacacactgctgccagt
aagccagcatacaagtctaagactggcaaatcaggtccttcaccacagcaggatctttct
gctgttgcagcggccgatcagcagtctgggtcgctggatgcttccaaagccaattcaatc
agcactgatggtgtaaaaggtctgaagaaagtgacaccctctctgaaaccaactgggcgt
gtgtctagttaccagaaccatggtggtaacacagcttatccatggtctagcggtaataca
ttttcagaaaagcagcagaaactctctggtggcaatcctacctcagctgcttataatcct
aaaaccaaggggttgcttcagcataactcgccagtggatcctgggtacatgagttcgatg
tactcaagttacaatggaaatgcatatggacctggcctttggtatgcatcacacctctat
ggatccccactgtatggtggttggaatccgctgtcagatgggaagtacaagcccagagga
aaaacctatggatcagggatgtatgggtttggcaacgaaaacctggagggctttaatgaa
ctgaagagaggaccaagaagtggtctcttcaagaatgaacagggcttgggagcaactgct
gtggcagctccaaaagggcaggagcttcctgcaagtgatggctccaatgcacttgtgcag
gatcagtacaataaggctgactttgttgaaacttactcagatgccaagttttttgttata
aaatcatacagtgaggatgacgttcacaagagcatcaagtacaatgtttgggcaagcacc
cccaacggaaataaaaagcttgactctgcttatcaagctgcaaacaacgaatcaagcaag
tcacctgtattcctgttcttctctgtcaacaccagcggtcagtttgttggacttgctgaa
atggttggtcctgttgattttaacaaaacagttgaatactggcagcaagacaagtggact
ggttgtttccctgtcaagtggcacattgtaaaggacattcctaacaatttattgaagcac
attattcttgagtataacgaaaacaaaccagtgacaaacagcagagatacccaagaggtt
aagcttgagcaaggccttcaggtgctaaagattttcaaggatcatgtctgcaagacatcc
atgttagatgattttggattttatgataatcgtgagaagattgtgcaagagaaaaaagcc
aagcgacagcatccgctggagaagatcatgaacaaagagctgcttactaccaacactgga
agtcaagaagttgacggaaagctgggactgcaggaacttaaggttgtaggtgagcaaaat
gctgtggtggaaaatggtgtgatggctgtagctgaaaaaagtgttgccctgatagacgca
aaccctacagcagttgcaaatgcctgttaa
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