Brachypodium distachyon (stiff brome): 100835205
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Entry
100835205 CDS
T01717
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X2
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100835205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100835205
04121 Ubiquitin system [BR:
bdi04121
]
100835205
03036 Chromosome and associated proteins [BR:
bdi03036
]
100835205
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100835205
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100835205
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100835205
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100835205
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100835205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
PHD_NSD
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
100835205
NCBI-ProteinID:
XP_010231244
UniProt:
A0A0Q3G320
LinkDB
All DBs
Position
2:19416174..19423589
Genome browser
AA seq
567 aa
AA seq
DB search
MEPPRSERATGESPTLKRSLRTRAPPRSVLRGTKSATDSSMVNMETETGVGNVEVVQQIQ
MQDEASTRRSSRPPKSRLVKYSCTESKGSGKSGALGDNEDATGSRIMQSPINLFIDECVF
CHSFRKSEFHGPMVQYLKGRVVSSNKGNPTNAIYVHEKCIKWAPRVRFNGDTVLNMKKEI
RRASGLKCSRCSLPGAALGCCIDKCAKTYHVPCALMIPECRWDPDNRNVWCPDHASSEAL
PCDAMPILESDISSSDHHNQELDIQGTSVIHNREDDQVDQLNTSSSSLPQRQFSNKDGIS
AGYHREEKEINKPSTLRSCPSDQWVLLGAVLSESEKDSLKEFASLTNATVVDKWEKNVTH
VIVGRYGDAECRRSYEVLMAILSGKWVVKAGWIEDCLGELILGQETCLSVQIPVSEISYE
VKFLYGSRTSIDGPTKGRARAAEEGPKLFAGLYFCLSAYLDSQDRENIQDLIAAADGQVL
EGSNYVHLSRKDLDRNSVKLYFIYNGESPKKFTSSFLLDLQKEMEECIQYRDSGAQVISN
LMLFDAIASYNTQILEPADHLASDMSE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagcccccgaggagcgagcgagcgacgggggagagtccgacgctgaagagatcgctc
cggactcgggcgccgccgcggagtgttctccgaggtaccaagtctgctacagatagcagc
atggtcaacatggaaacagaaacgggtgttggcaatgttgaggttgttcagcaaattcaa
atgcaggacgaggcttcaactagacgaagcagccgcccgcctaaatcaagacttgtcaag
tattcctgtacagaaagcaagggttcagggaaaagtggcgcgctgggagacaatgaagat
gccactggatcaaggataatgcaatcaccgatcaacttatttatagatgaatgtgttttc
tgccattcattcagaaaaagtgagtttcatggtccgatggtgcaatatttaaagggaagg
gtagtgtccagtaacaagggcaacccaacaaatgccatatatgtccatgagaaatgcata
aagtgggccccaagagtgcgtttcaatggtgatactgttcttaacatgaagaaggaaatc
aggcgtgcttcagggttgaaatgcagcagatgcagtctcccgggagcagcccttggttgt
tgcattgataaatgcgccaaaacctatcatgtcccgtgtgcactgatgatacctgaatgc
cgctgggatcctgataatcgtaatgtttggtgccccgaccatgcatcgtctgaggcactg
ccatgtgatgcgatgccaatattggaaagtgacatttcttcttccgaccatcacaaccaa
gaattagatattcaaggaacttctgtcattcataacagggaagatgaccaagtagatcag
ctgaacacctcaagttcttccttgcctcagcgacaattttccaacaaagacgggatttct
gccggttaccatagagaagaaaaagaaataaacaagcctagcaccttaagaagttgccct
tcggatcaatgggttttgcttggtgcagttttaagtgaatcagagaaggattccttgaag
gaatttgcatcactgactaatgcaaccgtggttgataaatgggagaaaaatgtgactcat
gttattgttggaagatatggtgatgctgaatgtagaagatcgtatgaggtcctgatggcg
atattgtctgggaaatgggttgtcaaagctggatggattgaggattgcctgggggagctg
attctaggtcaagaaacttgtttgtcggtgcaaattccagtctcagaaatttcttacgag
gtaaaattcctctatggttctcgcacatcaatcgatggaccaaccaaaggaagggccaga
gcagctgaagagggaccgaaactgttcgccgggctgtatttttgcctcagcgcatacttg
gactctcaagacagggaaaacatccaagatctcatagcagctgccgacgggcaggtactc
gagggaagcaattacgtgcacctgtcgcgtaaggatttggacagaaattcagtgaagcta
tacttcatctacaatggcgagtctccgaaaaagttcacttcaagctttcttcttgatctt
caaaaggagatggaggagtgcatccagtacagggactctggggcgcaggtgatcagcaac
ttgatgctgttcgacgctatcgcgtcctataacacgcagatcctggaacctgcagatcac
ttggcttcggatatgagtgagtga
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