Brachypodium distachyon (stiff brome): 100835300
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Entry
100835300 CDS
T01717
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100835300
04120 Ubiquitin mediated proteolysis
100835300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100835300
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100835300
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
U-box type E3
100835300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
HAMP
Motif
Other DBs
NCBI-GeneID:
100835300
NCBI-ProteinID:
XP_003562383
UniProt:
I1GQS1
LinkDB
All DBs
Position
1:complement(13077999..13085698)
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AA seq
1039 aa
AA seq
DB search
MASPTTPAPSPSRPQRTPDEVEDIILRKILLVSLTPPSSPNPAVAYLELTAAELLSESRP
LLALRDAAERILIDRLSLPDPPASSPSPFAFLAAAFRRAADEARKISTIRDAALQARLKA
SIAHIRGLILSYARIVAGNPDTFPSPPNAPHPAAELLIFLLAEAADPLDPTPSPGAPPPP
GFLDELLGNVEYETIEPVMGELYERLRQRVEKVSALGDFQRPLRVLRRLVGIPNCARALV
EHPKWIPKNQIMLIGEGRVMEISSLLGGFFHVSAIPDREFSGEPDVGKQCFSEASSRRQA
DLLSSFATIKSVMNSLQDGLRDILLVLLKNLDTREKVLEYLAEAINKNAGRSRMQVDPLK
CASSGMFVNLSAVMLRLCEPFLDKMESKKDKIDVKYLFCNDRIDFKNLTAINASSEEVSS
WIESWSQEHAQDNVSGEARFVESQEATSSGKNSSVSLPSKAGALARCSKKENFSFICECF
FMTARVLNMGVMKAVADFKHISQDLARCEDDLESNKAMRDQGGNSAQLDQDIERLEKIVE
SLSQDKLCYEAQILRDGAFLQRALSFYRLMILWSVDLVGGFKMPLPSQCPKEFSCIPEHF
LDDAMDLLALTSRIPKALEGFPLDDFLNFNIMFMASSYIKNPYLKAKMVEVLNCWMPQRS
GLKSTASLFEGHQLCLDYLVKNLLKLYVDIEFTGSHTQFFDKFNIRHNIAELLEYLWDVP
SHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMANTVAWNNRP
AQEREERLRVFHQSENIVRFDMKLANEDVGMLAFTSEQIPAPLLLPEMVERVASMLNYFL
LQLAGPQRKSLTVKDPEKYEFKPKQLLKQIATIYVHIARGDKEAVFPAAISKDGRSYNEQ
LFASAANILWKIGVDPQIIQEFMQLAGKAKAAASEAMDAEAILGDIPDEFLDPIQYTLMQ
DPVILPSSRVTIDRPVIVRHLLSDSTDPFNRSHLTQDMLIPDTDLKSRIDEFVRSQQSRK
RPAADSEIGEPDGAADMVE
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcatccccaaccacgccggcgccgtcgccctcgcgtccgcagcgcacgccagacgag
gtcgaggacatcatcctccgcaagatcctcctcgtctccctcacgcccccgtcctccccc
aaccccgccgtcgcctacctcgagctcaccgccgccgagcttctgtccgagtcgcgcccc
ctgctcgcgctgcgcgacgccgccgagcgcatcctcatcgaccggctatccctcccggac
ccgcccgcctcctcgccttcccccttcgccttcctcgctgccgccttccgccgcgctgcc
gacgaggcccgcaagatctccacaatccgcgatgctgcacttcaagcgcggctcaaggca
tccatcgctcacatccgcgggcttatcctctcctacgcacgcatcgtcgccggcaaccct
gacaccttcccctcgccccccaacgcgccccacccggccgcggagctgctcatctttctc
ctcgctgaggctgccgacccgctcgaccctaccccgtcccccggtgccccaccgccgcca
ggctttctggacgagctcttggggaacgtcgaatatgagaccatcgagccggtgatgggc
gaactgtacgagcgtctgaggcagagagtcgagaaagtatcagcacttggcgacttccag
cggccactccgtgtgctgaggcggctggtgggaatccccaactgcgccagggctctagtg
gaacatcccaagtggattcccaagaatcaaattatgctgatcggtgaaggaagagtcatg
gagatctccagcttgctggggggctttttccacgtcagtgcgatccccgaccgcgaattc
tcaggggagcctgatgttgggaaacagtgcttctctgaggcatcttcacgcaggcaagct
gatttgttgtcatctttcgcaaccatcaagagtgttatgaatagcttgcaggatggacta
agggatattctgctagtgctgcttaaaaatttggatactcgagaaaaggtccttgagtat
cttgcagaggcgataaataaaaatgcaggaagatctcgcatgcaggtggaccctttaaaa
tgcgcgagttcaggtatgtttgtcaatcttagtgctgtgatgctccgtctttgtgagcct
tttttggataaaatggagtcaaagaaggacaagattgatgttaagtacctcttctgcaat
gacagaatcgatttcaagaatttaacagcaataaatgcctcttcagaggaagtctcatct
tggatagagagctggagccaagagcatgctcaagataatgtcagtggagaggctcgcttt
gtagagtcacaggaagccacaagctcggggaaaaatagctcagtttctcttccttctaag
gcaggggcactagcgaggtgctcaaagaaagagaatttctcatttatttgcgaatgtttc
ttcatgacagcaagggtccttaatatgggggtgatgaaagctgtagcagacttcaaacat
atctctcaggatcttgcaaggtgtgaagatgatttggagtcaaacaaagcaatgcgggat
caaggaggaaattcagcgcagcttgatcaagatatagaacgcttggagaagatagtcgag
tctttatcacaagacaagctctgttatgaagctcagatactcagagacggtgcatttctt
caacgcgcactatctttctacagattaatgattttgtggtcagtagacctcgttggggga
tttaagatgcctctgccatcgcaatgccccaaggagttctcttgcattccggagcatttt
ctggatgatgcaatggatttacttgctctaacatctagaattccaaaggctcttgaaggc
ttcccattggatgacttcctcaattttaacattatgttcatggcgagctcttacattaaa
aatccttacctaaaagccaagatggttgaagtgttgaattgctggatgccacaaagaagt
ggcttgaaatccacagcctcattatttgaagggcaccagctatgtcttgattatcttgta
aaaaatcttctaaagctttatgtggatattgaattcaccggctcccatacacaattcttt
gacaagtttaatattcgacataatattgccgagcttcttgagtatttatgggatgttccc
agtcatcgaaatgcttggagacaaatagccaaggaagaggagaagggcgtatacttaaat
tttctcaacttcctaatcaatgatagcatctatcttcttgatgagagtttgaacaaaatt
cttgaactaaaggaaatagaggctgagatggctaacactgttgcatggaataatagacct
gctcaagaaagagaggagcggttgcgtgtatttcatcagtcagagaatattgttcgattt
gacatgaagctagcaaatgaggatgttgggatgcttgcattcacgtcagaacaaattcca
gcacctttgcttcttccagaaatggtggaaagggtggcgagcatgctaaattacttcctc
ttgcaacttgctggtcctcagaggaagtcattgactgttaaagatccagagaagtacgag
ttcaaaccgaagcagctattgaaacagattgccaccatctacgtccatatcgcaaggggg
gacaaggaagctgtcttcccagctgcaatctcgaaagatggaagatcatacaatgagcag
ttgtttgcgagcgcagcaaatattttgtggaagattggtgtagatccccaaatcatacag
gagtttatgcaacttgcgggcaaggcaaaagctgctgcctctgaggccatggatgctgag
gctatccttggggacataccagatgaatttcttgatccaattcagtatactctgatgcaa
gatcctgtgatactaccgtcatcgcgagtcacaatagatcgaccagttattgttcggcat
ttgctcagtgacagtacggatccttttaaccgctcccatctcactcaagacatgttgata
ccagacacggatctcaagtcacgtatcgatgagtttgtcaggtcccagcagtcaaggaag
cggccggctgctgactccgagatcggggagcctgatggagctgctgatatggtcgagtga
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integrated database retrieval system
