Brachypodium distachyon (stiff brome): 100835343
Help
Entry
100835343 CDS
T01717
Name
(RefSeq) plant UBX domain-containing protein 10
KO
K18726
FAS-associated factor 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100835343
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100835343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
UBA_4
FAF1
UBA_8
Thioredoxin_7
Motif
Other DBs
NCBI-GeneID:
100835343
NCBI-ProteinID:
XP_003574210
UniProt:
I1I5G8
LinkDB
All DBs
Position
3:complement(33256732..33263911)
Genome browser
AA seq
462 aa
AA seq
DB search
MAETVDDKVGYFQAVTGISDPDLCTEILAAHNWDLQLAVSSMTANPSSPEPSAYAPPPPP
PQFQPEFVASPSALAAPAPQQQPGIAWRLVTLPFYVVSGGVGLITGSIRLGVWVAGGVLS
RSLSLLGLAQGGGGNRLLEMAPSAAEAVDFLAEFERDFGAGRGPHFVAEGFADALQRAQR
EYKLLFVYLHSPDHPDTPAFCGGCLCSEPVAAFIDENFVAWGGSIRRTEGFKMSNSLNAS
RFPFCALVMASTNQRIMLLQQVEGPKSPEQMITILQRVVEECTASLVAARIEAEERLNNQ
RLREEQDVAYRAALEADQARERQRREEQEILEREAAEAERKRKEDEEAQVRAVQEAAEKE
AALARRRQEKAMALGAEPEKGPDVTRVLIRFPTGERKERRFHSSATITSLYDYVDSLDCL
KAEKYSLVSNFPRVTYGPEKHSQTLVEASLHPQASLFIEIEQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaccgtcgacgacaaggtcggctacttccaggccgtcaccgggatctccgac
cccgacctctgcaccgagatcctcgccgcccacaactgggacctccagctcgccgtctcc
tccatgaccgccaacccttcctcgcccgagccgtccgcatacgctcccccgccgcctccg
ccgcagttccagccggaattcgttgcgtccccgtccgcgctcgcggcgccggctccgcag
cagcagccggggatcgcgtggaggctggtgacgctccccttctacgtggtctccggtggg
gtaggcctcatcaccggctccatccgcctcggtgtctgggtcgccggcggcgtgctgtcc
cggtccctctccctcctcgggctcgcgcagggtggcggtggcaaccggttgctcgagatg
gctccatccgccgcggaggcggtcgacttcctagcggagttcgagcgcgacttcggggct
ggccgtggcccacacttcgttgctgagggcttcgctgatgcgctgcagcgtgctcagcgt
gagtacaagcttctcttcgtgtacctccactcccctgaccacccggatacccctgcattc
tgcggtggctgcctctgctccgagccggttgctgccttcatagatgagaactttgttgcg
tggggtggtagcatcagaaggactgaagggttcaagatgagcaacagcctgaatgcatca
cggttcccgttttgtgcgctagtcatggcatctacgaaccagagaattatgctattgcag
caggttgagggccccaaatcacctgaacagatgataacaattcttcaaagggtggttgaa
gagtgcaccgcgtcacttgttgctgccaggattgaagctgaagagagactaaacaatcaa
cgtttgcgcgaggaacaagatgttgcttacagggctgcacttgaagctgatcaggccagg
gaacgccaaaggagagaggaacaagaaatacttgaaagagaagctgcagaagctgagagg
aagcgtaaagaagatgaggaagcacaagtcagggcagtccaagaagcagctgaaaaggaa
gctgctcttgcaaggaggcgacaagagaaggcaatggctcttggagctgagcctgagaaa
gggcctgacgttactcgagttctcataagatttccaactggagagcgcaaagaaaggaga
ttccacagttccgccaccattacctccctatatgactatgttgattctttggattgcttg
aaagcagaaaagtacagcctagtttcaaattttccacgggtaacatacggtccagaaaag
cactcccaaacactggtggaagcaagtttgcatccacaagcaagcctgtttatcgagata
gaacagtga
DBGET
integrated database retrieval system
