KEGG   Brachypodium distachyon (stiff brome): 100835661
Entry
100835661         CDS       T01717                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase FANCM isoform X1
  KO
K10896  fanconi anemia group M protein
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100835661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100835661
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     100835661
SSDB
Motif
Pfam: Helicase_C ResIII DEAD Cas3-like_C_2 Spt5_N
Other DBs
NCBI-GeneID: 100835661
NCBI-ProteinID: XP_010237886
LinkDB
Position
4:28832203..28852417
AA seq 1399 aa
MAGSPPSYHPVLDDDDGFDWDAAVREIDSACALAASASTAPAAVSTSAPPAQPWAAAPSW
TAPLHVPSAAAAAPFPGPAVGGTRQSTLHRFVDSFTRRQASKENLPPAPVVPAAAPAGGG
ARFPESSDVGCSGRAGEDVAVEGSCAVALDHEAVQTWIYPTNVEVREYQQYIVQKALFTN
TLVALPTGLGKTFIAAVVMYNYFRWFPEGKIVFTAPSRPLVTQQIEACHNTVGIPQEWAI
DMKGNLSPEKRTSFWKSKRVFFVTPQILENDIRSGICMVKQLVCLVIDEAHRASGNHSYC
SAVRELVASNVPLRILALTATPGSKHPDIQGVINNLHISELIHRDESDPEVQRYVNTRTV
DLVKVPVGSDTAQINEMLLEIIRPHIAQLRAAGVIDNRDASNWTPHQLHILKEKFNQAPL
PNLPLEKKKEIRRSFAAVVSLCRISKLLLSHGIKPAHQSIEATWSEGAWNLFSRNEVFIK
AKEMMGSIVGKGVPSPKVHKLVEVLLDHFHKKNPKDSRVIIFSHYRESVKEILGALSDSG
TGIFRPAQFIGQTSTGDRLKGQTQKMQQAILQKFRSGEYNILVATSIGEEGLDIMEVDLV
ICFDANVSPLRMIQRMGRTGRKHEGRVVVLACEGQELQGYTRKQGSTRTMKNLLRKRDKF
DYHASPRMVPHVYKPEVKYVKLSIEKYVPHSKKIKVDASCVSPILNKLSEEDGQLIARYF
IACKEDIWKPSLVAFPSFQVSPCDIYKVPHSFRTTDMLVDAMQQLQDLSFSTTKNTYVQC
GSPLRESADVATVKDQAPEVECPYFSSGEVALSKSVCVPSSPVNKYPLHSFFSGDYVTVD
VGGFVSITFVPALPRSAEINKDKTNINWQQKVQNKTTPFSGPTTDGAYSRNLIFVTNASS
LAPHSPEYSKHDHDKHNIHPGSPSNTFTSPREKWDSPCNTKPGSPVLSVQQDSEELSPRL
THYIEEGIVPESPILDVNHQQLEIDSAANACFIPKVCSSKTHGQGVQTNGSGCQNGPLSF
WKKGQISAGVTEFPSSSRDDVLDKIQARTEEPMCPSNAKMCSPAAHTPTANLLCDSLSDE
WQVNSVVGDTSGSVQQAPKYRRLCKFGDKIKRVSSVSLNNRYDRFVEGQYDLANKTMPNQ
MEHAIGNKGKAKRRLDIYIDEEVEVSEDANISVDEDDGQSDDKYEDSFIDDQTTPTGQFT
QSEQGGQNTGDMMAFYRRSLLTQSTVVLPSRYQDVSDNSAYRAGSSSCSSGNLHNPIETP
RGIPQTHDTTGPSPLGSMERASSIKEQGEASVINCESTTKLDSRKRKLSFQQAVSIPVIN
LEPEPELEPAPPSAHLTTGVNNDIYWDDDAFFESLDFDAIEAQATEQLRLQKAQSAQKPA
ETKRASDLSFPPPSFDLGF
NT seq 4200 nt   +upstreamnt  +downstreamnt
atggccggatcgccgccgtcttaccaccccgtcctcgacgacgacgacggattcgactgg
gatgcggccgtgcgcgagatcgacagcgcctgcgccctcgctgcctcggcctccacggcc
cccgccgccgtatcgacctcggcgccacccgcccagccctgggcggccgctccctcgtgg
acggcgccgctccacgtcccctcggcggcggcggcggcgccgttccccgggcctgccgta
ggcggcacgcggcagtcgacgctccaccgcttcgtcgactccttcaccaggaggcaggcc
tcgaaagagaacctgccccctgcgccggtggttcccgcggcggcgcccgctggcggaggg
gcgcgctttccggagagctctgacgtggggtgctcagggagggcgggcgaggacgtggcc
gtggaggggtcctgcgccgtggctctcgaccatgaggcggtgcagacgtggatctatcca
actaatgtagaagtccgagagtatcaacaatatatcgtccaaaaggccttgtttacaaat
acactagtggctttgccaactggacttggcaaaacttttattgctgcagtagtgatgtat
aactattttagatggttccctgaaggtaaaatagtatttaccgccccttcacgcccgctt
gttactcagcaaattgaggcatgtcataatacagtgggtataccacaggagtgggcgatt
gatatgaaagggaatctaagccctgagaagcgaacaagtttttggaagtctaaaagagtg
ttcttcgtcactccacagattcttgagaatgatatacgatctggtatatgcatggtgaaa
caactggtttgcttggtgatagatgaagctcatagagcttctggaaatcattcttactgt
agtgctgtccgtgagttggtggcatcaaatgtaccattaagaattttagctttgactgct
acaccaggatcaaagcatccagatattcaaggtgttatcaacaatttacacatatcagag
ttgattcatcgtgacgaaagtgatcctgaagtccaacgatatgttaacacacgcacagtt
gatctcgtaaaggttcctgttggcagtgatacagctcaaatcaatgagatgcttttagaa
attatacgtccacatattgcccaactgcgtgctgctggggtgattgacaatagggatgct
tcaaattggaccccacatcaactgcacattttaaaggagaaattcaaccaagcaccccta
ccaaatcttcccttggaaaagaaaaaagaaattcgcagatcttttgcggctgttgtctca
ctttgtcgtataagtaaattgctattgagccatggaatcaagccagcacatcagtcgatt
gaagctacatggagtgaaggggcgtggaatttgttttcaaggaatgaagtcttcataaaa
gcaaaggaaatgatggggagcatcgtgggaaagggtgtgcctagtccaaaagtgcataaa
ttggtagaagtgttactcgatcacttccacaaaaagaatccaaaggactcaagggtgata
atattttcacattaccgggaaagtgtcaaagaaatattgggtgcactgagtgatagtggt
accggaattttcagacctgctcaattcatcggtcaaacctctacaggtgacaggctgaag
gggcagacacagaaaatgcagcaggctattttacagaaatttcggtccggggaatacaat
attttggtggcaacatcaattggtgaggaaggactagatattatggaggttgatcttgtg
atctgtttcgatgccaatgtctctccattaagaatgattcagcgaatgggaaggactggg
cggaagcatgaagggcgagttgtggttctggcttgtgaagggcaggagttgcaagggtac
acaaggaaacaaggaagtactcggacgatgaagaatctattacgtaaacgtgacaaattt
gattaccatgctagtcctaggatggttccacatgtctataaaccagaagttaaatatgtt
aaattgtcaatagagaagtatgttcctcactcaaagaaaataaaagtcgatgctagttgt
gtatctccaattttgaataagttgtcagaggaagacggtcaattgattgctcggtacttc
attgcatgcaaagaggatatttggaagccatctcttgttgcatttcctagttttcaggtt
tctccatgcgatatctataaagtaccccattcatttcgaaccacagatatgctagttgat
gctatgcaacaacttcaagatctttctttctctacaacaaagaatacctatgttcaatgt
ggaagccctttacgagaatctgctgatgtagcaacggtgaaggaccaggcaccggaagtg
gaatgtccttacttttcatctggagaagtggcattgagtaaaagtgtctgtgtgccaagt
tctccggtcaacaaatatcctctccactctttcttcagtggagattatgtaactgtggat
gttggaggcttcgtgtcaattacctttgtacctgccctgccgagatcagctgaaatcaat
aaggacaaaacaaacataaattggcaacagaaagttcagaacaagaccactcctttcagt
ggtccaacaacagatggtgcttattcaagaaatttgatatttgtaactaatgcatccagt
ttagcccctcattccccagaatattccaaacatgaccatgataaacataacatccaccct
ggatctccatctaacacatttacaagcccaagagaaaaatgggactcgccatgcaatact
aaaccagggagcccagttttgtcagttcaacaagatagtgaggaacttagtcccaggtta
acccattatattgaagaaggaattgttcccgagtctccaatcctcgatgttaaccaccag
caattagaaatagacagtgctgctaatgcttgttttattcctaaggtttgttcttcgaag
acacacggtcagggagttcagaccaatggttcaggatgccagaacggaccattgagcttt
tggaagaaaggtcaaatttctgctggggtcactgaatttccaagttcgtccagagatgat
gtcctagataagattcaagcaaggacggaagagccaatgtgtccttcaaatgcgaaaatg
tgtagtcctgctgctcatactcctacagcaaatctactgtgtgatagtttatctgatgag
tggcaggttaattcagtagtaggggatacatcagggtcagtacagcaagcacccaagtac
agaagactctgcaaatttggtgacaagatcaagagagtttcctcagtgtctttgaataac
agatatgatagatttgttgaaggacaatacgatcttgcaaataaaactatgcccaaccaa
atggagcatgctattggaaacaaagggaaggccaagaggcgtctggatatatacatcgat
gaggaagtcgaggtgtccgaagatgctaatatttcagtggatgaggatgatggtcagagt
gacgacaaatacgaagatagctttattgatgatcagacaactcctacaggccaattcacc
cagagtgaacaaggtggtcaaaacactggtgacatgatggccttctataggcgatcacta
cttactcagtccacagtagttctgccatcaagataccaagatgtctctgacaattctgct
tatagagctggaagttcgagctgttcatctgggaacttgcacaatcctattgagactcca
cgagggattcctcaaacacatgataccactggcccaagtcctctaggctccatggagaga
gctagttcgataaaggaacagggtgaagcaagtgtgatcaattgtgaatcaaccaccaaa
ttagacagcagaaagagaaagctaagcttccagcaagctgtctcaattcctgtcataaat
cttgaaccggaaccagaactggaaccggcaccaccttctgcacatcttactactggagtc
aataatgacatatactgggacgacgatgctttctttgagagccttgacttcgatgcaatc
gaagcacaagcgaccgagcaactgagactccagaaagcacaatcagcacagaaaccagca
gaaactaagcgagcatctgatctgagcttcccacctccatcatttgatcttgggttctga

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