Brachypodium distachyon (stiff brome): 100835941
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Entry
100835941 CDS
T01717
Name
(RefSeq) protein argonaute 4B isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100835941
03036 Chromosome and associated proteins [BR:
bdi03036
]
100835941
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100835941
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100835941
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100835941
microRNA pathway
RISC loading complex
100835941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100835941
NCBI-ProteinID:
XP_003567769
UniProt:
I1HFP5
LinkDB
All DBs
Position
2:complement(12806382..12812752)
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AA seq
914 aa
AA seq
DB search
MGSDDGGAEELPPPPPLPPNVVPIKADDVVKESPPDQPMKPKRSLVARPGLGRIGQPIQL
LSNHFKVSVKSSQDFFHHYDVSLKYEDDTPVDRLKGIGRKVIDKLQHTYLSELANKDFAY
DGEKSLFTIGALPQVTNEFIVILEDLGTGKTAANGSPGGNGSPGGSDKKRVRRPYQTKTF
KVELRFAAKIPMGAIADAIRGQESENSLEAIRVLDIILRQHAAKQGCLLVRQSFFHNNPR
NFVDLGGGVLGCRGFHSSFRGTQSGLSLNIDVSTTMIVQPGPVIDFLKANQKVDQPARID
WSKAKRALKNLRIKTIPANTEFKIVGLSDRNCNEQTFEWRQRNGSGGIDTVEITVYEYFV
KIRGIELQYGSLPCINVGRPKRPTYFPAELCMLLPLERYTKALSTLQRSSLVEKSRQKPQ
ERMSTLDEALKRSNYESDPMLRACGISIARNFTQIEGRVLQAPRLRVGNNEDILTHKGRW
SLKHKKLYQTCSVERWAVVNFSARCDVRGLVRDLKRNGIAKGLKIQDPFDHVFEESPSMR
RAPAAQRVDAMLAQLEKKLPDKPNFLLCLLPDRKNCEVYGPWKKKCLADLGIVTQCLAPP
ARVNDQYIDNVLLKINAKLGGLNSLLRIEVERTIPLVSKVPTIILGIDVSHGPPGQSDRP
SIAAVVSSREWPYISKYRATVNTQSPKLEMVSSLFKPQGPEDDDGLIRVSLIDFYNTSGK
RKPDHVIIFRDGVSESQFTQVINIELEKIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQT
GSPDNVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFTADELEEFVH
SLSYVYQRSTTAVSVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGRGHTSAGSAAVQPL
PGLHERVRNTMFFC
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgggctctgatgatggaggggctgaggagttgccaccaccacctcctctgcctccaaat
gtggtgcccatcaaagctgatgatgtcgtcaaggaatcgccaccggaccagccaatgaag
cccaagaggtccctggtggccaggcctggtttaggaaggatcgggcagcccatccagctc
ctctctaatcactttaaagtctccgtgaagagttcacaggacttcttccatcactacgat
gttagtttgaagtatgaggatgatacaccagttgataggctgaaagggataggcagaaag
gtgattgataaactacagcatacatacctctccgaacttgcaaacaaggacttcgcttat
gatggtgaaaagagcctttttactatcggcgctcttcctcaagtcaccaatgaattcatc
gtgatcttggaggatcttggaactggaaagactgctgccaatgggagccctggaggtaat
ggcagtcctggagggagtgacaagaagagagtcaggaggccgtaccagacaaagactttc
aaagtggagctgcgctttgcagcaaaaatacccatgggtgcaattgctgatgccatcaga
ggtcaagaatcagagaactccctggaggctatccgagttcttgatatcatactgaggcag
catgctgcaaaacagggctgccttttagtccgccagtcatttttccacaacaatcctcgt
aattttgttgacctgggcggtggtgtgttggggtgccgaggatttcactcaagtttccgt
ggtacacagagtggactctccctgaacattgatgtttccactacaatgattgttcaacct
ggtcctgttattgatttccttaaagctaaccagaaagttgatcagcctgccagaattgac
tggtcaaaagccaagcgtgctcttaagaacttgaggataaaaacaattcccgcaaataca
gaattcaaaattgttggtttgagtgacagaaattgcaatgaacagacgtttgaatggagg
cagaggaatggtagtggaggtatcgatactgttgaaataacagtctatgagtacttcgtt
aagattagaggcatagaactgcagtatggtagtcttccctgtatcaatgtagggaggcca
aagcgtccaacgtattttcctgcggagctttgcatgcttcttccactggaaagatacacc
aaagctctgtctactctgcaaaggtcctcgcttgttgagaaatccagacagaagcctcag
gaaagaatgtcaacccttgatgaggcacttaaacgtagcaactatgaatctgaccccatg
ctgagggcatgtggcatttcaattgcgcggaattttactcaaattgaagggagggtcctg
caagcgcccaggctgagagttggcaacaatgaagatatcttaacacataagggacgttgg
agtttgaaacacaagaagctgtatcagacctgctctgtcgagaggtgggcggttgttaat
ttctctgcgcgatgtgatgttcggggtcttgtccgagacctcaaaaggaatggaattgcg
aagggacttaaaatacaggacccttttgatcatgtatttgaagagagcccgtcgatgaga
cgagcgcctgcggcacaaagagtggatgctatgcttgctcagttagaaaagaaactacct
gataaacccaatttccttctgtgccttctccctgataggaaaaactgcgaagtttatggc
ccttggaagaagaagtgtcttgctgatcttggtattgttacacaatgtctagctcctcca
gcaagagtaaatgatcagtacatagataatgtgctgttgaagataaatgctaagcttggt
gggctgaactcattgctgagaattgaagtagaacgcacaatacctcttgtgtcaaaggtg
cctactatcatcttgggcatcgacgtgtcacatggtccacctgggcaatctgatagacct
tccattgccgcggtggttagctctcgagagtggccttacatctctaaatatagagcaaca
gtgaacactcagtcacccaaactagagatggtgtcctccttgtttaaaccacaggggcct
gaagatgatgatggcctcattcgggtatcacttattgacttctacaacactagtgggaag
cgcaaaccagatcacgttattattttcagggatggagttagtgaaagccaatttactcag
gtcataaacatcgagcttgaaaagatcattgaggcatgcaagttcctcgatgagaagtgg
tcgcctaagttcacagtcattgttgctcagaagaaccatcataccaaatttttccagact
ggatccccggataatgttcctcccggcactgtggtggacaaacaagtgtgtcatcccaag
aatttcgacttctacatgtgtgcacatgctggcatgatcggaacatcaaggccaacacat
tatcatgttctgcacgatgagatcggcttcacagctgacgaacttgaggaatttgtgcat
tcactctcctatgtgtaccagaggagcacaacggcggtatcagtcgttgctccaatttgc
tatgcgcatctggcggctgcccaggtcggcacattcctgaagtttgaagacatgtcggac
gcttcgtcaagccagggaagaggccatacatctgcgggcagcgctgcggtgcagccgctg
cctgggctccatgagagagtgaggaacaccatgttcttctgctga
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