Brachypodium distachyon (stiff brome): 100836040
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Entry
100836040 CDS
T01717
Name
(RefSeq) flowering locus K homology domain isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100836040
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100836040
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Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
100836040
NCBI-ProteinID:
XP_003571781
UniProt:
I1I3Z3
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All DBs
Position
3:27183673..27193021
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AA seq
587 aa
AA seq
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MVDVHKNSTERWVTQMVRKSHGREGNEVMGTVMEQGFSHLDSADDTNCSAGENRYPGWPG
TTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPDEP
IPPAMDALLRVYQNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEASQT
DIRVLDCNLPPAALDEDRIVEIWGQPTRVRKALELVARHLRKYLVDRSVIPLFDPHVPMT
TSHVDTSPCYYSDHPEGPLQAISSVYAEDLHRQPPWTDSCYPRGRYHVETDVTGYRWEAP
TCFGRYRSVTPPCMGAYRQETSSPMEAYLSAPMGLSSHHNLTSYGSQSTPPIGTSAAAER
IRSLISVYGQQTHPVGKVYQSANMGNHPHLETSLYGSEYHPSRLSPSTATNLPPTHGVSE
DGLQASPSMRMHPPATVENLLHCRVSACGPDVLLPVVVPSLTSKSPAITSQVKEKMQVPI
FYAEAIIGPTGARIEYIRRASRSSILINDLDDSLMSIDITGSSATDVQTAEHLIKAFMAE
AAAASPGHNFDFIPSYLSPVSPRADTLTTSYAGRESGMTEQRLEMSF
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgtgcacaaaaattccacagaaagatgggttactcaaatggtcaggaaatct
catggacgagagggaaatgaagttatggggactgtcatggaacaaggcttttctcatcta
gactctgcagatgataccaattgctctgctggtgaaaatagataccctggctggcctgga
accactgtctttaggatgctaatttcctcgacaaaagtcggtgcgataattggtcagaaa
ggagagagggttagaagactgtgcgaggaaacaaaagcctctgtccgtgtaataggtggt
cattttgctgcagcagagcgggttgttttgatttttgcaaaggagcaaccagatgagcca
atacctccagctatggatgcgctactaagagtatatcagaacatagttaatgatgatggt
ttaggcatggggtctgacagtgcggttgtgacccgtattcttataccaagtgagcaggca
ctaaaccttattggcgagcagggttcgatgataaatcttattgaggaagcttctcaaacc
gacattcgtgtccttgattgtaacttgccgccagctgcgcttgatgaagataggattgtt
gaaatatggggacaacctacacgagtgcggaaggctttagaacttgttgctcgtcatttg
agaaagtatctggttgatcgaagtgtcatcccattattcgaccctcatgtgcctatgacg
acgtcacacgtggacacgtccccatgttactacagtgaccatcctgagggccctctgcaa
gcaattagttcagtatatgctgaagatcttcaccgtcaacctccatggactgatagttgc
tatccgaggggcaggtatcatgtggaaactgacgtaactgggtacagatgggaagcacct
acatgttttggaagatatcgatcagttacgcctccatgtatgggtgcatatagacaagaa
acatcttcacccatggaagcatatctatcagctccaatgggattaagttcgcaccacaac
cttacttcatatggatcacaatcaactccaccaattggtacatcagctgctgctgaaaga
atacgctcccttatatcagtatatggacaacaaacacatccagtggggaaggtatatcaa
tcagccaacatgggaaaccatccacacttggaaacatctttatatggaagtgaatatcat
ccaagtaggctatctccatcaactgccactaatctacctccaactcatggtgtgtctgaa
gatggactacaagcatcaccatccatgaggatgcatccaccagccactgtggaaaacctt
ctgcactgtcgtgtgtctgcgtgtgggccagatgtactgctgcctgtggttgtgccttca
ttaactagcaaatcaccagcaatcacttcgcaggttaaggaaaagatgcaagttccaatt
ttctatgctgaagctataattggccctactggtgcaagaattgaatacattcgtcgggct
agcaggtcaagcatcttgataaacgatttggatgatagtttaatgtctatagatatcact
ggaagttctgcaacagatgtccagactgcagagcatctcataaaggccttcatggctgaa
gccgccgccgcttcccctggtcacaatttcgacttcattccatcatatttgtcaccagta
tctcctcgagctgataccctaacaacctcgtatgctggaagagaaagtggcatgacagag
caacgccttgaaatgagcttctga
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