Brachypodium distachyon (stiff brome): 100836198
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Entry
100836198 CDS
T01717
Name
(RefSeq) meiotic recombination protein SPO11-1 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100836198
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100836198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
100836198
NCBI-ProteinID:
XP_003559449
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Position
1:complement(5918094..5922672)
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AA seq
383 aa
AA seq
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MEGREKRRRATVLDDDDELRGRRREQEAALLLHKIKGLVGWVVAEVGAGRSPSVALNRYQ
NYCTSAAASPPTCACSYDAPVGTDILCLLRKEFHASRLSVLLRVLFVVQQLLQQNKHCSK
RDIYYMYPSIFIEQAVVDRAINDICILFKCSRHNLNVVPVAKGLVMGWIRFVEGEKKVYC
ITNVNAAFSIPVSIETIKDIVSVAHYILVVEKETVFQRLANDKFCERNRCIVITGRGYPD
VPTRRFLRHLVEQLHLPAYCLVDSDPYGFDILATYKFGSMQLAYDANLLRVPGIRWLGVF
TSDFEEYCLPDYCLLDLSSEDRKKLEGILTRCYLHREAPEWRAELEAMLEKGVKFEIEAL
SASSISFLSQEYIPQKIKLGRHI
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagggagaagaggaggcgcgcgacggtgctcgacgacgacgacgagctgcgg
ggacggcggagggagcaggaggcggccctcctcctccacaagatcaaagggctggtgggc
tgggtagtcgcggaggtcggcgccggtcgatccccctccgtggcgctcaaccgctaccag
aattactgcacctccgccgccgcgtccccgcccacatgcgcctgcagctacgacgcaccc
gtcggcacggacatcctctgcctcctccgcaaggaattccacgcctcccggctcagtgtg
cttctcagggttctgttcgtggtgcagcaactgctgcaacagaacaagcactgctccaag
agggacatctactacatgtacccctccatttttatagaacaagccgttgttgatcgtgcg
atcaatgatatctgcatactcttcaagtgcagccgtcataatctcaacgtggttcctgtc
gcaaaaggtttggtgatgggctggataagatttgtggagggtgaaaagaaagtctattgc
ataacaaacgtcaatgcagctttctcaattccagttagcatcgaaacaatcaaagatatt
gttagcgttgctcactacatacttgttgttgagaaggagacagtgttccagcgtttggcc
aatgataagttttgtgagaggaatcgctgcattgttattactggaagaggatacccagat
gtcccaacaagaagattcttgcgccaccttgttgaacagctgcacttacctgcttattgc
ttagtagattcagatccgtatggtttcgacattctggccacctataaatttggttcaatg
caattagcgtatgatgcaaatctactgcgtgtgcccgggatacggtggctcggggtcttc
acttctgactttgaggaatattgtcttccagactactgtctacttgatctgtcatctgaa
gataggaagaaacttgaaggaattctcaccaggtgttacttgcacagggaagccccagaa
tggagggcggagttggaagccatgctggaaaagggcgtcaagtttgagattgaggcattg
tcagcaagttccatttcctttctatcacaagagtacatcccacagaagatcaaattaggg
aggcatatatag
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