Brachypodium distachyon (stiff brome): 100836378
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Entry
100836378 CDS
T01717
Name
(RefSeq) protein SHI RELATED SEQUENCE 1
KO
K27807
short internodes/stylish family transcription factor
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100836378
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100836378
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GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
100836378
NCBI-ProteinID:
XP_014757670
UniProt:
I1IS50
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Position
4:complement(41224597..41226810)
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AA seq
343 aa
AA seq
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MAGFPLGGGGGGGGSSPAAPSSSSAHHHHHHHQPSSADVSAFLYTTASRGGGFQLWGQTQ
PQHEQQQQLTHPFYASNLIRFAPDPDDLPSAAAHSLAGGASSSTSSRGGGAGGGLSCQDC
GNQAKKDCSHQRCRTCCKSRGFACATHVKSTWVPASKRRERQQQLLALAASAAMAGPSSG
DRDPSKRPRARISRTTPTTSSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDVAEAELAY
QTTVSIGGHVFKGILHDVGANNNAAGASAAAVCGGGSGDYQFRLTGDVSPPSSAAAAGGE
AAGGGGGGNVVASSAVVMDPYPTPGLYGSFPAGAPFFHGHPRQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttccctctaggcggcggcgggggcggcggcggaagcagccccgcggcgccg
tcgtcatcgtccgcgcaccaccaccaccaccaccaccagccctcctccgccgacgtgtcc
gccttcctctacaccaccgccagccgtggtggcggcttccagctctggggccagacccag
ccgcagcacgaacagcagcagcagctcacgcacccgttctacgcgtccaacctcatccgc
ttcgcccccgaccccgatgacctcccctccgctgccgcgcactcgctcgcgggcggcgcg
tcctcgtccacgtcgtcccggggcggcggcgccgggggcggcctgagctgccaggactgc
ggcaaccaggccaagaaggactgctcgcaccagcggtgccgcacctgctgcaagtcccgg
ggcttcgcctgcgccacccacgtcaagtccacctgggttcccgcctccaagcgccgcgag
cgccagcagcagctcctcgctctcgccgcctccgccgccatggccggcccttcctccgga
gatcgagacccctctaagcgccctcgcgcgcgcatctccagaaccacccccaccacttcc
tcaggggatcagcagatggtgactgtggcggagcggttcccccgcgaggtgagctcggag
gcggtgttccgctgcgtgcgcctcggcccggtcgacgtggcggaggcggagctcgcgtac
cagaccaccgtcagcatcggcggccacgtgttcaagggcattctgcacgacgtcggcgcc
aacaacaacgctgccggcgcttctgcggccgccgtgtgtggcggcggcagcggcgactac
cagttcaggctcacgggcgacgtgtcgccgccaagcagcgcggccgcggcgggaggcgaa
gcagccggaggcggcggcggcggcaacgtcgttgcgtcatcggctgtggtcatggaccca
tacccgacgcccggcctctacggctcgttcccggccggcgcgcccttcttccacggccac
ccgagacagtga
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