Brachypodium distachyon (stiff brome): 100836381
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Entry
100836381 CDS
T01717
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100836381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100836381
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
RNases
100836381
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
100836381
NCBI-ProteinID:
XP_003576986
LinkDB
All DBs
Position
4
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AA seq
558 aa
AA seq
DB search
MSTPSGSGEPDGTAPAPAPAASTYYDVYGPDAKPDVVFKEASSDSTLNLQDVQGLVTWVI
GEGMLPSWVFVKNKPLIPKVVLLYVPGLDAALYMSQSRLLSSLKELCGNPKPVLASSCVP
DERHTIDALLTCRVKRKRQSKPSNQSYESDGGKLSRLDDLKDIPFPVKYYTLSAKELDEN
GYSFSLPGFVPTVSAPSGASPYDILALDCEMCVTEAGFELTRVTLVDIKGEVVLDKLVKP
ANPITDYNTRFSGITAEMLSDVTTTLQEIQEEFVRLVYKETILVGHSLENDLMALRISHD
FIIDTAVLYKYNRGPRCKIALRVLTNKYLSREIQNTGSGHDSVEDARAALDLAILKIKHG
PDFGSPPSFSRRKLSSILHESGKKCSLIDDVYVLDRYSDASSNSIAVFSDDDALSRSMKE
VKNDKISFVWTQFSGLISYLRTRAEDPDKLKSCVAETIALKTCDTKTARKRAKEQTCPEL
KEILSGLDKKIRNLYSALPENAMFIICTGHGDTPLVQRLKKMLNHGEETIESRENIVQAL
EDLQAQAEVALCFCCVKH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgccctccggctccggcgagcccgacggaaccgcccccgccccggcccccgcc
gcctccacctactacgacgtgtatggccccgacgccaaacctgatgttgtttttaaggag
gccagttcagattctacattaaatttacaggatgttcaggggctggtcacttgggttatt
ggtgaaggcatgctgccttcttgggtgtttgtgaaaaacaagcctcttataccgaaagtt
gtccttctctatgttcctggactcgatgcagctttatatatgtcgcagtcccgcctcctt
tcttctttgaaagagttgtgtggcaatccgaaacctgttctagcttcaagctgtgtacca
gatgaaaggcataccattgacgcactcctgacatgcagagtaaagcgaaagcgtcagtca
aaaccatcaaaccaatcatatgaatctgatggaggtaaattatcaaggctagatgaccta
aaagatataccatttcctgttaaatattacacactttctgcgaaagagttagacgagaat
ggctactctttcagtttaccaggttttgtccctaccgtttcagctccttcaggcgcttct
ccatatgacattcttgcacttgattgtgagatgtgtgtgacagaagctggatttgaactt
acaagggtgacattggtcgatattaaaggagaggtggtactagataaactagttaagcct
gccaatccaatcaccgattacaatacaaggttcagtggaatcactgctgagatgctatct
gatgtgaccacaaccctccaggagattcaggaagagtttgttagacttgtgtacaaagaa
accattcttgttggacactctttggaaaatgacctcatggcattacggatctctcatgat
ttcatcattgatactgctgttttgtacaaatataatcgtggccctcgctgtaaaattgct
ttacgtgtccttacaaacaaatatcttagccgggaaatccagaacacagggtctggccat
gacagcgtggaagatgcaagagctgctctagatcttgccattttgaaaatcaaacatggt
cctgattttggttctccaccatcgttttcacggcggaagttgtcttccatcctccatgaa
agtggaaaaaaatgttccctcattgatgatgtgtatgttcttgatcgatattcagatgct
tctagcaattcaattgcggttttctcagatgatgatgccctctccagatcaatgaaagag
gtaaaaaatgacaaaatcagctttgtctggactcagttttcaggattgatctcttatcta
cgtacaagagctgaagatcctgataaattgaaatcctgtgttgcagagactattgcattg
aaaacctgtgatacaaaaactgctcgaaaaagagccaaagaacaaacttgtccagagttg
aaggaaatcttgagtggactggacaagaaaattagaaatttatacagtgcactgcctgaa
aatgctatgtttattatatgcactggtcatggggatactcctctggtacaaagattaaag
aaaatgcttaaccacggagaagaaacaattgaaagccgggaaaatattgttcaagctttg
gaagatctacaagcccaagcagaagttgctctatgcttctgttgtgtcaagcattag
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