Brachypodium distachyon (stiff brome): 100836415
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Entry
100836415 CDS
T01717
Name
(RefSeq) organic cation/carnitine transporter 4
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdi02000
]
100836415
Transporters [BR:
bdi02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
100836415
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
100836415
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Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
MFS_1_like
TMEM234
DUF1304
Motif
Other DBs
NCBI-GeneID:
100836415
NCBI-ProteinID:
XP_003580618
UniProt:
I1J279
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All DBs
Position
5:25237158..25241789
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AA seq
522 aa
AA seq
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MSTEALLAGGGGGGDRRRVSIDEALAEHAGEFGRWQLRHFVLVSAAWALEALHSMVIIFA
DREPPMSCLAAAGASCGADRCAVGSGWGWAQGSASSTVAEWGLVCGERYKVGLVQAIFFA
GCMIGAGVFGHLSDSFLGRKGSLQVACFLSAIFGLLTALSPNYWAYAALRLLTGFSTGSV
GLCSFVLATEPIGPSRRGAAGMSTFYFFSGGIAALAGVAALFQSSWRALYVFTSLPSLAF
ALAVLPFVSESPRWFLVRHRAHDALRVLRDIASKNGRVFPDGVTLKLDDDVEEDDENVDK
NNKVEEQERNSASDSSILDVFRSRTTRARLVLSVLINLLCSVVYYGLSLNVVNLKTNLYV
SVAINSLAEMPAYLLTALLLDRFGRKPLGIGTMLLSGAFCIAGSLIVPGAGAGGAMRIVR
MGCGVVGIFGMAATYNLLFIYTAELFPTVVRNAALGCTSQASQMGAILAPLVVVLGERVP
FAVFGVSGIVGGLLVFYLPETMNKPLYDTMAGLEEGEKTVLK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggaggcgctgctcgcgggcggcggcggcggcggcgaccggcggcgggtgagc
atcgacgaggcgctggcggagcacgcgggcgagttcgggcggtggcagctgcggcacttc
gtgctggtgtcggcggcgtgggcgctggaggcgctgcacagcatggtcatcatcttcgcc
gaccgcgagccgcccatgtcctgcctcgccgccgccggcgcgtcctgcggcgccgaccgc
tgcgccgtggggtccgggtgggggtgggcccaggggagtgcgtcgtcgacggtggccgag
tggggcctcgtctgcggcgagcgctacaaggtcggcctcgtccaggccatcttcttcgcc
ggctgcatgatcggcgcgggcgtgttcgggcacctatcagactcattcctgggccgaaaa
ggttccctccaagtggcctgcttcctcagcgccatcttcggcctgctaaccgccctctcc
cccaactactgggcctacgcggccctccgcctcctaacaggcttcagcacgggcagcgtg
ggcctctgctccttcgtgctggccacggagcccatcgggccctcccgccgcggcgccgcg
gggatgtccaccttctacttcttctccggcggcatcgccgccctggccggcgtcgcggcg
ctgttccagtcctcctggcgcgccctctacgtcttcacctccctcccttccctcgccttc
gcgcttgccgtgctccccttcgtgtccgagtccccgcgctggttcctcgtccgccaccgc
gcccacgacgccctgcgcgtcctccgcgacatcgcttccaaaaatggcagggtgttcccc
gacggagtcactctcaagctcgacgatgatgtcgaggaggacgacgagaatgtcgacaag
aacaacaaggtcgaagagcaagagaggaattcggcgtcggattcgtcgatcctggacgtg
ttcaggtcgcgcacgacgagggcgcggctggtcctgtcggtgctcatcaacctgctctgc
tccgtggtctactacgggctgagcctcaacgtggtgaacctcaagaccaacctctacgtg
agcgtggccatcaactcgctggccgagatgccggcctacctgctcacggcgctcctcctg
gaccgattcggccggaagccgctcggcatcggcaccatgctgctcagcggcgccttctgc
atcgccggcagcctcatcgtcccaggagccggcgccggtggagccatgaggatcgtgagg
atggggtgcggcgtggtggggatcttcgggatggcggcgacgtacaacctgctgttcatt
tacacggcggagctgttcccgacggtggtgcggaacgcggcgctcgggtgcacgtcgcag
gcgtctcagatgggggccattctcgcgccgcttgtcgtggtgcttggggaaagggtgccg
ttcgcggtgtttggagtgtcgggtatcgttggtgggttgcttgtgttttatctcccggag
acgatgaacaagccgttgtatgacaccatggccgggctggaggaaggcgagaagaccgtg
ttgaagtga
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