Brachypodium distachyon (stiff brome): 100836441
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Entry
100836441 CDS
T01717
Name
(RefSeq) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100836441
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bdi01007
]
100836441
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100836441
Enzymes [BR:
bdi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
100836441
Amino acid related enzymes [BR:
bdi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100836441
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100836441
Prokaryotic type
100836441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FapA
Myosin_tail_1
DUF7040
RPW8
Syntaxin
Motif
Other DBs
NCBI-GeneID:
100836441
NCBI-ProteinID:
XP_003566382
UniProt:
I1HDY2
LinkDB
All DBs
Position
2:7222155..7229607
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AA seq
456 aa
AA seq
DB search
MLDINLFRKEKGGDPDLVRNSQRSRFASVELVDEVIVLDEEWRQRQFELDKIRQELNKTS
KEIGKLKAKKQDATELIQSTEEIKSRLAAKETEVQDAKSTLDAKLVAIGNLVHESVPVSN
DEANNAIVRTWGERRLEGNLKNHVDLCLMLDIVALEKGADVAGGRGYFLKGNGVLLNMAL
INFGLAFLGIRGYTPMQTPFFMRKETMGRCAQLAQFDEELYKVTGDGEEKYLIATSEQPL
CAYHLGDRIYPADLPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNN
SWELHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCS
NCTDYQARRLGIGFGQKKNDEQSKQFVHMLNSTLTATERTLCCILENYQKEDGVEVPKAL
RPFMGGIDFLPFKKPLDSKQAADSKPTKSKPKGNAA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatcaacctcttccgcaaggagaagggcggcgatcctgaccttgtacgcaat
tcgcagcgcagccgcttcgcctccgtcgagctcgttgacgaggtcatcgtgctcgacgag
gagtggcgccagaggcagttcgagcttgacaagatccggcaggagctgaacaaaaccagc
aaggagatcgggaagctcaaggccaaaaagcaggatgctacggagctgatacagagcaca
gaagagattaagagcagattggccgccaaggagacggaggtgcaagatgccaagagcacc
ctcgatgccaagctcgtcgccattggcaacttggtgcatgaatctgtgcccgtcagcaac
gacgaggcaaacaacgctattgtacggacatggggagaaaggaggttggaggggaacttg
aagaatcatgttgatctttgcttaatgcttgacattgtagctctggaaaagggtgctgat
gtagctggtggaagaggttactttttgaagggtaatggtgtcctcctgaatatggcgttg
ataaattttgggctagcgttcctgggtatacgaggctacactccaatgcaaactcctttt
ttcatgagaaaggaaactatgggaagatgtgcccagttggcccaatttgatgaggagctt
tacaaagtaacgggagatggagaggaaaagtatctcatagctacatccgagcaaccactg
tgtgcttaccatctaggtgaccggatttatcctgctgatttgccaattagatatgctggg
tactcaacctgcttccggaaagaagctggttcccacgggagggacacagctggcatattc
agagtccaccagtttgagaagatcgaacagttctgtgttacaagtccaaatgacaataat
tcctgggaactgcatgaagaaatgattaaaaattcagaagatttttataaggagattggt
ctaccatatcaacttgtatctattgtgtctggtgctcttaatgatgctgcagctaagaag
tatgatttggaagcatggttccctgcatccaaaacctacagagaattagtgtcctgttca
aattgcacagactatcaagcaaggaggcttggaataggctttggccagaaaaagaatgat
gagcaatccaagcagtttgttcatatgttgaattctacgctgactgcaactgagaggacc
ctttgctgtattctggagaactaccagaaggaggatggtgttgaagtgccgaaggcactg
cgaccattcatgggtggaatagactttcttcctttcaagaaacctcttgatagcaaacaa
gctgctgactccaagcccactaagtctaaacctaagggaaatgctgcttga
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