Brachypodium distachyon (stiff brome): 100836453
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Entry
100836453 CDS
T01717
Name
(RefSeq) FACT complex subunit SSRP1-B
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100836453
03036 Chromosome and associated proteins [BR:
bdi03036
]
100836453
Transcription factors [BR:
bdi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
100836453
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
100836453
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100836453
NCBI-ProteinID:
XP_003568796
UniProt:
I1HL68
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Position
2:complement(33469483..33476141)
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AA seq
643 aa
AA seq
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MTDGHLFNNISLGGRVGNNPGQFKLHSGGLAWKKQGGGKTIEVDKADIISMTWMKIPRSY
QLSVGTKEGIRYMFKGFREQDVSNLANFIQKSTGVAPEEKQLSVSGHNWGGVEITGNMLS
FNVGSKEAFEVSLADVSQTQMQGKTDVVLEFHVDDTTGANEKDSLMDISFHIPTTNTQFP
GDEDRPSAHIFWQKILAIADVGSSEEAVVTFEGIAILTPRGRYSVELHMSFLRLQGQAND
FKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFQTEVVAEMDLKLSE
EVLAEKYKDRLQGSYNGLEHEVFSKILRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASMSSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFDFVSGKNLKIMNLGEDGQGRTGAVAAALDSTDDSLHDPHLERIKNQAGDEE
SDEEDEDFVADKDDSGSPSDDSDEGSDASLSGGESEKSSKKEASSSKPPVKRKPKSGDTE
GSEKRKPKKKKKDPNAPKRALAPFMYFSKAERANLKSSNPVLGTTDIAKKLGEKWQKMSA
EEKQPYVEQHLVDKKRYQEETAAYRDNAGAAPVDVESDDQLSD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccacctcttcaacaacatctcactcggcggccgcgttggcaacaaccct
ggtcagtttaagcttcattcgggaggccttgcatggaagaagcagggtggaggaaagacc
attgaggttgataaagctgatataatttccatgacatggatgaaaatccccagatcatat
cagcttagcgtcgggaccaaagaggggatccggtacatgttcaaaggcttccgtgaacag
gatgttagcaatcttgctaactttatacaaaagagcacgggagtcgcaccagaggagaag
cagctttctgttagcggccataattggggcggagttgaaattactggcaatatgcttagc
tttaacgttggttcaaaggaagcatttgaagtttctctagcagatgtatcacaaactcaa
atgcaaggaaaaacagacgttgttcttgagttccatgttgatgatactaccggggctaac
gagaaagattcactgatggatataagttttcatataccaactacaaatactcaatttcct
ggagatgaggatcgtccttcagctcatatcttctggcagaagatcttggctatagctgat
gttggctcatcagaagaggctgttgttacatttgaaggaattgccattcttactccaaga
ggtcgatatagtgttgagcttcacatgtcattcttacgactccaaggacaagctaatgat
tttaaaattcagtacagcagtattcttcgcctgtttgttttgccgaagtcaaacaatcct
catacctttgtggttattacacttgatccgccaattcggaaaggacagacattatatcct
cacattgttattcagtttcaaacagaggtagtagctgaaatggacctgaaactaagtgag
gaggttttggctgaaaagtacaaggataggctgcaaggctcttacaatggtctagaacat
gaggtattctccaaaatcctccgtggcctgtctggtgctaaagtaacaaggccaagcaca
ttccgcagttgtcaagatggatatgctgtgaaatcatcacttaaagctgaagatggattg
ctctatcctcttgaaaagggttttttctttctaccaaagcctccaacactcattctgcat
gaggagattgagtatgttgaatttgagcgtcatggtgctgggggtgctagtatgtcatct
cactatttcgatctccttgtcaagctaaaaaatgaccaagaacatcttttcagaaatatc
caaaggaatgaataccataacctcttcgacttcgtcagtggtaaaaatttgaaaatcatg
aatcttggagaagatggccaaggtagaactggtgccgttgcagctgctcttgacagcact
gatgacagccttcacgatccacatctggagcgaataaagaatcaggctggtgatgaagaa
agtgatgaagaggatgaggattttgtggcagacaaggacgacagcggatcccccagtgat
gattctgatgaaggttctgatgctagcttaagtggaggagaaagcgagaaatcttcaaaa
aaggaagctagtagttcaaagccaccggtgaagaggaagccaaagagtggggacacagaa
ggttcagagaaaagaaagccgaagaagaagaagaaagatcccaatgcccctaaaagagca
ttagcaccattcatgtacttctcgaaggctgagcgagcgaatttgaagagcagcaatccc
gtactgggtacaacagacatagcgaagaagcttggggagaagtggcaaaagatgtcagct
gaggagaagcagccatacgttgagcagcatctagtggataaaaaacgataccaggaggag
actgccgcataccgcgacaacgcaggcgcggctccagttgacgttgagtccgacgatcaa
ttatctgactga
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