Brachypodium distachyon (stiff brome): 100836521
Help
Entry
100836521 CDS
T01717
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100836521
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100836521
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RBD_AKAP-17A
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
100836521
NCBI-ProteinID:
XP_010228563
UniProt:
I1H516
LinkDB
All DBs
Position
1:complement(60734826..60742620)
Genome browser
AA seq
479 aa
AA seq
DB search
MSSSGVGGGGQQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGRIVNTKSGVGANRNQ
AFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVTI
EGVQASDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTASAAREALDGRSIP
RYLLPEHVLSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGR
RVEAEGNVLLASIENMQYAVSVDVLHTVFSTFGTVQKIAIFEKNGGTQALIQYPDVTTAT
VAKEALEGHCIYDGGYCKIHLSYSRHTDLNVKAHSDKSRDYTIPEGAHQAAPQPGLPPTS
AGWQGNPQAAGPYGPPGVAAQNHGTNGQVPNWNSGNPGYPQPQAPGNQGYPAAPGNSGYP
GQMYSAPPQYATSGGFAAPQPPPSHEMHPSQQMLSAHHGNQQRPAGAPATGQPPPYYHH
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgggcgtcggtggcggtgggcagcagttccggtacacgcagacgccgtct
aaggtgctccacctccggaacctgccatgggagtgcacggaggaggagctcgtcgagctc
tgcaagcccttcggtcgcatcgtcaacaccaagtccggcgtcggtgccaaccgcaaccag
gccttcgtcgagtttaccgatgttaatcaagccatatcaatggtctcatattttgcatca
tcttcggaaccagcgcaaattcgaggcaaaactgtttacattcagtattcaaatagacaa
gaaataattaataacaagagccctggggagactgctggaaatgtattgcttgttaccata
gagggtgttcaagctagtgatgtcaccattgatgtcatccatttggttttctcggctttt
ggatttgttcacaaaatagccacttttgagaaggctgcaggtttccaggcactgatccag
tatactgatgcacccaccgcttcagctgcaagagaagccttagatggaagaagcattcca
aggtacttgcttccggagcatgtactatcctgccacttgcgaatttctttctctgcacat
aaggatttgaacattaagttccaatcacaccgcagcagagattacaccaatccttacctt
ccagttaattcttctgctatagatagcacattgcagcctgctgttggtgctgatggaagg
agagtggaggctgagggcaatgttcttcttgcgtcaattgagaatatgcagtatgccgtt
tcagtagatgttctccataccgtgttctctacattcggtacagtccagaaaattgctatt
tttgagaagaacggtggaacacaagctttgattcagtatcctgatgtaactactgctaca
gttgcgaaggaagcattggaagggcattgcatctacgacggtggctactgtaagattcac
ctgtcatactctcgtcatactgatctcaatgtaaaggcacatagtgacaagagcagggat
tacacaattccagaaggagcacaccaagcagcaccacagcctggtctaccacctacatct
gctgggtggcaaggtaaccctcaagcagctggaccatatggaccaccgggtgttgctgct
caaaaccacggtacgaacggacaagttccaaattggaattccgggaacccagggtacccg
caaccacaagctcctggcaaccaagggtatcccgcagctcctggcaactcagggtatcca
ggccagatgtactctgccccgcctcagtatgcaacatcagggggcttcgctgcccctcag
ccgcctccgtcccatgagatgcatccttcgcagcagatgctatctgcacaccatgggaat
cagcagagaccagcaggtgcccctgcgaccgggcaaccgcctccgtattaccaccattga
DBGET
integrated database retrieval system
