Brachypodium distachyon (stiff brome): 100836671
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Entry
100836671 CDS
T01717
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100836671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100836671
Enzymes [BR:
bdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
100836671
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100836671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
100836671
NCBI-ProteinID:
XP_003575128
UniProt:
I1IAG9
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All DBs
Position
3:complement(47452978..47459824)
Genome browser
AA seq
407 aa
AA seq
DB search
MRLPLSPRIAAVPAMPPRRRRRLAGPALPPIPPVLSSTPPPTPFSETPKLETPQQHPPPA
RRRLPLDGDAQPEEWHPLPLSAGDLFLPLTLPTGQTFLWRRTSLSPLRFTGAVGSHLLSL
SHLPDGGLAFLLHNDDADTSSCSVATARAAICDYLNATVPLADLWRQFTAADARFAEVAA
RLGGGGARVLRQDPVECLFQFLCSSNNNIARIEKMVWTLAGYGERLGEVGGFVFHRFPTI
EQLAQVSEQELRDAGFGYRAKYIVGTATELMAKPGGGEKWLALLRDRELPEVIEGLCTLP
GVGPKVAACIALFSLDKNQAIPVDTHVWKVATQYLLPELAGKSLTPKLSIVVADAFVAKF
GSYAGWAQNVLFIGQLPTQKLLAAEVPSDATKPAKRKRGGKTVEMRT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccctctctcccctcgcatcgccgccgtccccgccatgccccctcgccgccgc
cgccgcctcgccgggccggccctgccacccatccctcccgtcctctcctccaccccaccg
cccaccccattctcagaaacccccaaactcgaaacccctcagcagcaccctccgcccgcc
cgccgccgccttcccctcgacggcgacgcacaaccagaagagtggcaccccctccctctt
tccgccggcgacctcttcctccctctcactctccccaccggacagaccttcctctggcgc
cgcacctccctctccccgctccgcttcaccggcgccgtgggctcgcacctcctctccctc
tcccacctcccggacggcggcctcgccttcctcctccacaacgacgatgccgacacctcc
tcttgctccgtggccaccgcccgcgccgcgatctgcgactacctgaatgccaccgtcccg
ctcgccgacctctggcgccagttcaccgccgccgacgcgcgcttcgccgaggtcgcggcg
cggctcggaggcggtggcgctcgggtgctcaggcaagacccggtcgagtgcttgttccag
ttcctctgctcctccaacaacaacatcgcgcggatcgagaagatggtgtggacgctggcc
ggctatggggagcggctcggcgaggtcggcgggttcgtgttccaccggtttcccaccatc
gagcagctcgcgcaggtgtcggagcaggagcttcgggacgccggctttggctacagggca
aagtacatcgttggcactgctacagaattgatggccaagcctggcggtggtgagaaatgg
cttgccttgttacgtgacagggaacttccagaggtgattgagggtctttgcaccctgcca
ggcgttggcccaaaagttgcagcctgtattgctctgttctccctggataagaatcaggct
attcctgttgatacacatgtctggaaggttgctacacaatacctgttgcctgagctagct
ggcaagagcttgacaccaaaactcagtattgttgttgctgatgcatttgtcgctaaattt
gggagttatgccggttgggcacagaacgttcttttcatcggtcagctgcctacacaaaaa
ctcctggctgcagaagttcccagtgatgccacaaaacctgccaagaggaagcgtggggga
aagactgttgaaatgcggacataa
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