Brachypodium distachyon (stiff brome): 100836701
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Entry
100836701 CDS
T01717
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
bdi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100836701
03460 Fanconi anemia pathway
100836701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdi03032
]
100836701
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100836701
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100836701
DNA replication proteins [BR:
bdi03032
]
Eukaryotic type
DNA Topoisomerases
100836701
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100836701
FA (Fanconi anemia) pathway
100836701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
100836701
NCBI-ProteinID:
XP_003578369
UniProt:
I1IRH1
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All DBs
Position
4:39852583..39861827
Genome browser
AA seq
868 aa
AA seq
DB search
MAPKVLMVAEKPSIALSIASAISGGRMSTRKGSTDVHEFDGTFQGSQAFFRVTSVIGHVF
SVDFPPAYQNWEGTDPVDLFNAPVLRSECNPKVHIRRHLAQEARGCTYLILWLDCDREGE
NICYEVINCTGIPENEVGRRIFRAKFSSVTEKDISNAMDNLVLPNKDEALSVDARQEIDL
KVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQINTFKPEKFWSLRTY
VIKDGDEIQLEWDRKKLFDFDVTVMFQKMVANDGTLIVTDISVKEECKARPSGLNTVNLL
KVASSALGIGPQTAMHMAERLYTQGYISYPRTESTAYPASFDFRSVLSALVHNPLWSNNI
RTLMDAGFVKPRQGHDAGDHPPITPMRSASEEALETDAWRLYQYICQHFIGTVSPDCRYT
RTAVEFTSGGEIFRCVGHRVTSKGFTSIMPWLAVAENNLPTFKNGDTVSIHKVDIYEGST
TPPDYLSESELISLMEKNGIGTDASIPVHINNISERNYVQVNSGRRLVPTALGTTLIRGY
QCIDADLCLPDIRSFIEQQITLIAKGKADHLQVIQHVIQQFMKKYSYFVKKIENMDALFE
AQFSPLADSGRLLSKCGKCGRYMKYISTQPMRMYCITCEEVYYLPQNGTIKLYKEIICPL
DGFELLLFSMVGPDAKSFPLCPCCYNSPPFEGIDKLFGAIKLDDTGKLGKGAGMPCFLCP
HPTCKQSMITQGVCACPECSGTLILDPVSAPKWRLLCNMCNCVVLLPHAAHRITTTDKKC
STCESTIIEVDFNKKATPLEDGATLHEGCILCDELLHSLIEMKHGKSFFMRRGRGRGRGR
ARGRGGSRGRGRRGNSRHDDPKMSFRDF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaggttttgatggtcgcggagaagcccagcatcgcgctctccatcgcctcc
gccatctccggcggtcgcatgtctacgcggaagggaagtacagatgtccacgagtttgat
gggacgtttcagggttctcaggcatttttcagagtgacatcagtcattggacatgtcttc
agtgtagattttccacctgcatatcaaaactgggaagggactgatccagtagaccttttt
aatgctccagttctgagatctgagtgcaatccaaaggttcatatccgcaggcatctagcc
caggaagctcgaggctgcacgtatctaatactttggctcgactgcgaccgagaaggagaa
aacatttgctatgaagtaattaattgcactgggattcctgaaaatgaggttggcagaaga
atattccgagccaaattttcatctgtaaccgagaaagacatatcgaatgctatggataat
cttgtgttgccaaacaaagatgaggcactatctgtggatgctcgccaagaaatagacttg
aaggtaggagtagcatttactcgatttcagacccgatattttcaaggaaaatatggaaat
ctcgactctagagtcatttcgtatggtccttgtcaaacacctacacttggattctgtgta
cagcgctatcagcaaattaacacattcaagccagagaaattctggtctttgagaacctat
gttatcaaagatggtgatgaaatacagctagaatgggacaggaagaaactctttgatttc
gatgtcactgtaatgttccagaagatggtagccaatgatggaactctaatagtaacagat
atatctgtgaaggaagagtgcaaagctcgcccatctggtcttaatacagtgaatttgctt
aaggttgcatcgagtgcgctaggtattggaccccagacagctatgcacatggccgaacgg
ctttacactcaaggatacatcagttatccgcgtacagagagcactgcataccctgcgtca
tttgattttagaagtgtgctttctgcgctagtgcataatccgttgtggtctaataacatc
cgtaccttaatggatgctggtttcgttaagcctcgtcaaggtcatgatgctggggaccat
cccccaattactccaatgagatcagcatcagaggaagctttggaaactgatgcgtggagg
ctgtaccagtacatatgccagcattttattggcaccgtcagtcctgattgtagatataca
aggactgcagttgagttcacttcaggtggagagattttccgttgtgttggccatcgagtc
acttcgaaaggatttacatctattatgccatggcttgctgtggccgagaataatcttcct
acatttaaaaatggagacactgttagtattcataaggttgacatatatgagggaagcacc
acacctcctgattatcttagtgagagtgaattgatctctctcatggagaagaatggcata
ggcacagatgcatcaattcctgtgcatataaacaacatttctgaacgtaattatgtccag
gtaaattctggaagaagattagtaccaactgccctgggaactactttgataagaggatat
cagtgtattgatgctgatctctgcctgccagatattcgaagcttcattgagcaacagatt
actctaattgcaaaaggcaaagctgatcatcttcaagttattcaacatgttattcagcag
tttatgaaaaagtactcttactttgtgaagaagattgaaaacatggatgcgttgtttgaa
gcacagttttcacctctggcagactctgggcgtctattgagcaagtgtggaaaatgtggt
cggtatatgaaatatatttccactcagccaatgagaatgtattgtataacttgtgaggag
gtctattatcttccccagaatggtaccattaagctttacaaggaaattatttgcccgctt
gatggttttgagttgcttctgttctcaatggtgggccctgatgcaaaatctttcccacta
tgcccctgttgctataatagtcctccattcgaaggcatcgacaaactttttggtgctatc
aagcttgatgacaccggcaagcttgggaaaggagctggcatgccttgcttcctttgccca
cacccgacatgcaaacaatcaatgataactcaaggagtttgtgcttgtccagagtgtagt
ggtaccctaattcttgatccagttagtgcgcccaaatggcgccttctctgcaatatgtgt
aactgtgttgtcttactcccacatgccgctcatagaatcaccactacagataagaagtgc
tcaacatgtgagtctactatcattgaagttgacttcaataagaaagctacccctcttgaa
gatggagctactttgcatgagggttgcatcttgtgtgatgagctgttacattcactcatt
gagatgaagcatgggaaatccttttttatgcggagaggcagagggagaggtaggggtaga
gcccgtgggagaggaggcagccggggcaggggacgacgggggaactcaaggcatgacgat
cctaagatgagtttcagagatttttga
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