KEGG   Brachypodium distachyon (stiff brome): 100836701
Entry
100836701         CDS       T01717                                 
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03440  Homologous recombination
bdi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100836701
   03460 Fanconi anemia pathway
    100836701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdi03032]
    100836701
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100836701
Enzymes [BR:bdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     100836701
DNA replication proteins [BR:bdi03032]
 Eukaryotic type
  DNA Topoisomerases
   100836701
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     100836701
   FA (Fanconi anemia) pathway
     100836701
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_TOP3B Toprim
Other DBs
NCBI-GeneID: 100836701
NCBI-ProteinID: XP_003578369
UniProt: I1IRH1
LinkDB
Position
4:39852583..39861827
AA seq 868 aa
MAPKVLMVAEKPSIALSIASAISGGRMSTRKGSTDVHEFDGTFQGSQAFFRVTSVIGHVF
SVDFPPAYQNWEGTDPVDLFNAPVLRSECNPKVHIRRHLAQEARGCTYLILWLDCDREGE
NICYEVINCTGIPENEVGRRIFRAKFSSVTEKDISNAMDNLVLPNKDEALSVDARQEIDL
KVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQINTFKPEKFWSLRTY
VIKDGDEIQLEWDRKKLFDFDVTVMFQKMVANDGTLIVTDISVKEECKARPSGLNTVNLL
KVASSALGIGPQTAMHMAERLYTQGYISYPRTESTAYPASFDFRSVLSALVHNPLWSNNI
RTLMDAGFVKPRQGHDAGDHPPITPMRSASEEALETDAWRLYQYICQHFIGTVSPDCRYT
RTAVEFTSGGEIFRCVGHRVTSKGFTSIMPWLAVAENNLPTFKNGDTVSIHKVDIYEGST
TPPDYLSESELISLMEKNGIGTDASIPVHINNISERNYVQVNSGRRLVPTALGTTLIRGY
QCIDADLCLPDIRSFIEQQITLIAKGKADHLQVIQHVIQQFMKKYSYFVKKIENMDALFE
AQFSPLADSGRLLSKCGKCGRYMKYISTQPMRMYCITCEEVYYLPQNGTIKLYKEIICPL
DGFELLLFSMVGPDAKSFPLCPCCYNSPPFEGIDKLFGAIKLDDTGKLGKGAGMPCFLCP
HPTCKQSMITQGVCACPECSGTLILDPVSAPKWRLLCNMCNCVVLLPHAAHRITTTDKKC
STCESTIIEVDFNKKATPLEDGATLHEGCILCDELLHSLIEMKHGKSFFMRRGRGRGRGR
ARGRGGSRGRGRRGNSRHDDPKMSFRDF
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggctcccaaggttttgatggtcgcggagaagcccagcatcgcgctctccatcgcctcc
gccatctccggcggtcgcatgtctacgcggaagggaagtacagatgtccacgagtttgat
gggacgtttcagggttctcaggcatttttcagagtgacatcagtcattggacatgtcttc
agtgtagattttccacctgcatatcaaaactgggaagggactgatccagtagaccttttt
aatgctccagttctgagatctgagtgcaatccaaaggttcatatccgcaggcatctagcc
caggaagctcgaggctgcacgtatctaatactttggctcgactgcgaccgagaaggagaa
aacatttgctatgaagtaattaattgcactgggattcctgaaaatgaggttggcagaaga
atattccgagccaaattttcatctgtaaccgagaaagacatatcgaatgctatggataat
cttgtgttgccaaacaaagatgaggcactatctgtggatgctcgccaagaaatagacttg
aaggtaggagtagcatttactcgatttcagacccgatattttcaaggaaaatatggaaat
ctcgactctagagtcatttcgtatggtccttgtcaaacacctacacttggattctgtgta
cagcgctatcagcaaattaacacattcaagccagagaaattctggtctttgagaacctat
gttatcaaagatggtgatgaaatacagctagaatgggacaggaagaaactctttgatttc
gatgtcactgtaatgttccagaagatggtagccaatgatggaactctaatagtaacagat
atatctgtgaaggaagagtgcaaagctcgcccatctggtcttaatacagtgaatttgctt
aaggttgcatcgagtgcgctaggtattggaccccagacagctatgcacatggccgaacgg
ctttacactcaaggatacatcagttatccgcgtacagagagcactgcataccctgcgtca
tttgattttagaagtgtgctttctgcgctagtgcataatccgttgtggtctaataacatc
cgtaccttaatggatgctggtttcgttaagcctcgtcaaggtcatgatgctggggaccat
cccccaattactccaatgagatcagcatcagaggaagctttggaaactgatgcgtggagg
ctgtaccagtacatatgccagcattttattggcaccgtcagtcctgattgtagatataca
aggactgcagttgagttcacttcaggtggagagattttccgttgtgttggccatcgagtc
acttcgaaaggatttacatctattatgccatggcttgctgtggccgagaataatcttcct
acatttaaaaatggagacactgttagtattcataaggttgacatatatgagggaagcacc
acacctcctgattatcttagtgagagtgaattgatctctctcatggagaagaatggcata
ggcacagatgcatcaattcctgtgcatataaacaacatttctgaacgtaattatgtccag
gtaaattctggaagaagattagtaccaactgccctgggaactactttgataagaggatat
cagtgtattgatgctgatctctgcctgccagatattcgaagcttcattgagcaacagatt
actctaattgcaaaaggcaaagctgatcatcttcaagttattcaacatgttattcagcag
tttatgaaaaagtactcttactttgtgaagaagattgaaaacatggatgcgttgtttgaa
gcacagttttcacctctggcagactctgggcgtctattgagcaagtgtggaaaatgtggt
cggtatatgaaatatatttccactcagccaatgagaatgtattgtataacttgtgaggag
gtctattatcttccccagaatggtaccattaagctttacaaggaaattatttgcccgctt
gatggttttgagttgcttctgttctcaatggtgggccctgatgcaaaatctttcccacta
tgcccctgttgctataatagtcctccattcgaaggcatcgacaaactttttggtgctatc
aagcttgatgacaccggcaagcttgggaaaggagctggcatgccttgcttcctttgccca
cacccgacatgcaaacaatcaatgataactcaaggagtttgtgcttgtccagagtgtagt
ggtaccctaattcttgatccagttagtgcgcccaaatggcgccttctctgcaatatgtgt
aactgtgttgtcttactcccacatgccgctcatagaatcaccactacagataagaagtgc
tcaacatgtgagtctactatcattgaagttgacttcaataagaaagctacccctcttgaa
gatggagctactttgcatgagggttgcatcttgtgtgatgagctgttacattcactcatt
gagatgaagcatgggaaatccttttttatgcggagaggcagagggagaggtaggggtaga
gcccgtgggagaggaggcagccggggcaggggacgacgggggaactcaaggcatgacgat
cctaagatgagtttcagagatttttga

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