Brachypodium distachyon (stiff brome): 100836748
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Entry
100836748 CDS
T01717
Name
(RefSeq) LOW QUALITY PROTEIN: probable kinetochore protein ndc80
KO
K11547
kinetochore protein NDC80
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100836748
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
KMN network proteins
NDC80 complex
100836748
NMS complex
100836748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc80_HEC
Ty3_capsid
Asp_protease_2
gag-asp_proteas
Motif
Other DBs
NCBI-GeneID:
100836748
NCBI-ProteinID:
XP_024314492
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All DBs
Position
2:8836795..8851093
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AA seq
770 aa
AA seq
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MAAEQSQREAEAARAAEDAIRDRLPHEVLNIQDQLQHQQGSVDSLQVDSYIDQFETWMQL
MRKDNPYLPKNFFVLRFISGLKDHIKHMIKCYKPITLIVTYAFARQLELAYLSTIKKTAA
PTTTSKPPAQAAGGQVVRPAAPRDNRQRGGNDRPIEPRKCWYCPEIWVPGHRCKGMQCAV
NAIQMQDDYESEDETKVHNMVEAPNPKLPEAEQVQEEVEAVLHISAKAINGIASDGTFSL
LLHINGQKAVALVDSGSTNTFMDYSFAIKRNLLFVLAVARKVKVAGGVLLIQTVPSAIIR
RFHFRNRAGADNQPLYPRNLDHTFSRRDSDAFSICSSRPSSIGTAPAHAAPITNLSDRSS
QAAALRVVNAYLAPNIHLRAPLPAARDILAAFRHFLERLQYPVQTSLEEDLLILLRLLAC
PYKLTRSALKAPGTPHSWPPLLSVLYWLTLLCRVADNLDASSSPSAATSNDLMPYITESY
XLTADDDAVASLDEEYMSKASVQTDAFAVAVQALEKEVEDLEAKRSKQTSEPSRRKALEE
KKEAFTADVQKFDAVVKSWSTKIKEKEESLVVLEKELEAKVMNGQHMLADNEELVKKVEA
QVVNVRDADRMTREMQAVEHDISKLENXECALEKGWELAAALVTKLEDIEGLAEQCNQAL
KKLKLGTDFKYMLNAKGSSPSEILGTTYKTVLKAALSALANETKRIFASKHDESNDLQKH
LQGNAKIIEEKRNHVSVLEAKTNEENLRIEETKDKFLLRRVLKSMSFTPK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcaaagccagagagaagcggaggcagctcgtgcggcggaggatgctatc
agagatcgtctcccccacgaagttctgaacattcaggaccaactgcaacatcaacaggga
tccgttgattccctgcaagttgacagttatattgatcagtttgaaacatggatgcagctg
atgaggaaggacaatccttatttacctaagaatttctttgttctcagatttatcagtggg
ctcaaggatcacatcaagcacatgatcaaatgctataaacctatcaccttgattgttact
tatgcttttgctcgccagcttgaattggcttatctatctaccatcaagaaaactgcagct
cctactacaacttcaaaaccacctgcacaggctgcaggagggcaagttgtcagacctgct
gctccaagagacaacagacaaaggggaggaaatgataggcccatagagcccaggaaatgt
tggtattgccctgaaatttgggtaccaggacatagatgcaaaggaatgcaatgtgcagtt
aatgccattcaaatgcaagatgattatgaaagtgaagacgaaacaaaggtgcataacatg
gtggaagcccctaatcctaaacttcctgaagcagaacaagtgcaggaagaagtggaagct
gttctccatatttcagccaaagctataaatggaattgctagtgacggcaccttttccttg
ctgttacatattaatgggcaaaaggctgtagcacttgttgacagtggtagtacaaacacc
ttcatggactatagttttgctatcaagaggaatcttctttttgttcttgctgtagcaaga
aaagtgaaagtagcaggtggagttttgctgattcaaaccgtaccgagtgccattatccgc
cgatttcacttcaggaatcgcgctggtgctgacaaccagcccctctacccccggaacctc
gaccacaccttctcccgccgcgactccgacgccttcagcatctgcagcagccgcccttcc
tccatcggcacggctcccgcccatgccgcccccatcaccaacctctccgaccgaagctcc
caggccgccgccctgcgcgtcgtcaacgcctacctcgcccccaacatccacctccgcgcg
cctctccccgccgctcgcgacatccttgccgccttccgccacttcctcgagcgcctccag
taccccgtccagacctccttggaggaagacctcctcatcctccttcgcctcctcgcctgc
ccctacaagctcacccgttccgccctcaaggctcccgggaccccgcactcctggccgccc
ctcctatccgtcctctactggctcacccttctctgtcgcgtcgctgacaacctcgacgca
tcctcttccccatccgccgcgacctccaatgacctcatgccctacatcacggagagctat
nttctcacagccgacgatgatgccgtcgcctctctcgacgaggagtacatgtcgaaggcc
agtgtccaaaccgatgcgttcgctgtggccgttcaggcactggagaaggaggttgaggat
ctggaagcgaagcggagtaagcaaacctcagagccttcacgtcggaaggcgctggaggag
aagaaggaagcattcactgcggatgttcagaagtttgatgcggtggtgaagagctggtcc
accaagatcaaagagaaggaagagtcgttggtggtcttggagaaggagctggaggcgaag
gtgatgaatggccagcacatgttggctgacaatgaggagctggtgaaaaaggtggaggcg
caggtggtaaatgtaagggatgccgataggatgactagggagatgcaagcagttgagcat
gatatttccaaactggaaaatngtgaatgcgcgctggagaagggatgggagcttgcagct
gcgttggtcaccaagcttgaggatatcgaggggcttgctgagcagtgcaaccaggccctc
aaaaagttgaaactcggtaccgatttcaaatacatgctaaatgcaaaaggatcttcccca
tctgaaatccttggtaccacctacaaaactgtcctaaaggctgcgctcagtgctcttgct
aatgagactaaaaggatatttgcctcaaaacatgatgagtcaaatgatctgcaaaagcat
ttgcaaggaaatgctaaaatcatagaggagaaaaggaaccatgtgtctgttctagaggct
aaaactaatgaggaaaatttgagaattgaagaaaccaaggacaaattcctcctgagaagg
gtgctgaagtctatgagttttactcccaagtaa
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