| Entry |
|
|---|
| Name |
(RefSeq) small nuclear ribonucleoprotein E
|
|---|
| KO |
| K11097 | small nuclear ribonucleoprotein E |
|
|---|
| Organism |
bdi Brachypodium distachyon (stiff brome)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:bdi00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100836785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bdi03019]
100836785
03041 Spliceosome [BR:bdi03041]
100836785
03032 DNA replication proteins [BR:bdi03032]
100836785
Messenger RNA biogenesis [BR:bdi03019]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
100836785
Spliceosome [BR:bdi03041]
Complex A
U1 snRNP components
Sm proteins
100836785
U2 snRNP components
100836785
Complex B
U1 snRNP components
100836785
U4/U6.U5 tri-snRNP components
100836785
Complex C
U2 snRNP components
100836785
DNA replication proteins [BR:bdi03032]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
100836785
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
3:complement(1593553..1595784)
|
|---|
| AA seq |
88 aa
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEI
NIKKNTRKSLGRILLKGDNITLMMNTGK |
|---|
| NT seq |
267 nt +upstreamnt +downstreamnt
atggcgtccaccaaggtgcagcggatcatgacccagcccatcaacctcatcttccgcttc
ctccagagcaaggcgcgcatccagatctggctcttcgagcagaaggacatgcggatcgag
ggaaggatcatcggctttgacgaatacatgaatttggtcttggaggatgctgaggagatc
aacatcaagaaaaacactagaaaatctctgggtcggatcctcctgaaaggagataacatt
acactaatgatgaatacgggaaagtaa |
|---|
