Brachypodium distachyon (stiff brome): 100836949
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Entry
100836949 CDS
T01717
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100836949
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100836949
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_3
RRM_PARP14_3
P_C10
TGF_beta
Motif
Other DBs
NCBI-GeneID:
100836949
NCBI-ProteinID:
XP_003568375
UniProt:
I1HJ19
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All DBs
Position
2:21989497..21995510
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AA seq
444 aa
AA seq
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MAEASKVIHIRNVGHEIAEADLLQLLQPFGAVSKIVMLRAKNQALLQMQDIHSSVSALQY
YTTVQPSVRGRNIYMQFSSHQELTTDQSSHGRNSDQDSEPNRILLATIHHMIYPITVEVL
HQVFKAYGYVEKIVTFNKSAGFQALIQYQSRQEAVEAFGALHGRNIYDGCCQLDIQYSNL
SELQVHYNNDRSRDFTNPSLPTEQRPRSSQQGYPDPGGLYAFQQPGAPYAQMGRAAMIAA
AFGGTLPPGVTGTNERCTLIVSNLNTDKINEDKLFNLFSLYGNIVRIKVLRNKPDHALVE
MADGFQAELAVHYLKGAMLFGNKLEVNYSKYPTITPAPDAHEYTNSSLNRFNSNVVKNYR
HCCAPTKMIHISALPQDISEDTILTHVSEHGSVVGTKLFEVNGKRQALVLFETEEEATEA
LVSKHASSLEGNTIRISFSQMQSI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgtccaaagtgatccacatccggaacgtcgggcacgagatcgccgaggct
gatctgcttcagctgctgcagccgttcggcgcggtctccaagatcgtcatgctgcgtgcc
aagaatcaggcgcttctccagatgcaagacattcattcctctgtgagcgcgctacaatac
tacacgacggtccaacctagcgtaaggggaaggaatatttacatgcaattctcatctcac
caagaacttaccactgaccagagctctcatggacggaattctgaccaggactcagaaccc
aaccgaatcctcttagctactattcaccacatgatatatcctataacggtggaggttcta
catcaagttttcaaagcttatggatatgtggagaagattgtcacatttaacaagtcagct
ggttttcaagctcttatccagtatcaatcacgtcaagaagctgtggaagcatttggtgct
ttgcatggaaggaacatatatgatggttgctgtcagctagacatccagtattcaaatctc
agtgaattgcaagtccattacaacaatgatcggtctagggatttcacaaatccatcatta
cctacagaacaacgtccaaggtcctctcagcaaggttatccagatcccggtggtctctat
gccttccaacaacctggagctccatacgcacagatgggaagagctgcgatgattgcagct
gcatttggtggaacattaccgcctggagtgactggtaccaatgaacggtgcacattgata
gtcagtaatttgaacacagataaaatcaatgaggataagcttttcaatctcttctcttta
tatgggaacatagttcgaatcaaggtactgcgcaacaaaccagatcatgccctcgtagaa
atggctgatgggtttcaggctgagctagctgtgcattatctgaagggggcaatgctattt
gggaacaagctggaagttaactactcaaagtaccccactataacacctgcccctgacgca
catgaatacacgaattcaagccttaacaggttcaatagcaatgtggtcaagaactaccga
cattgctgtgctccgaccaagatgatccacatttctgccctcccacaagatatatctgag
gacacaatccttactcatgtgtctgaacacggttctgttgtcggcacaaagctgttcgag
gtgaacggcaagaggcaggctctcgtcttgtttgagaccgaagaggaggctacggaggcc
cttgtatcgaaacatgcaagctcgctggagggaaataccatccggatctcgttctcccag
atgcagagtatatag
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