Brachypodium distachyon (stiff brome): 100836961
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Entry
100836961 CDS
T01717
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
bdi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100836961
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100836961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100836961
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100836961
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100836961
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100836961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
100836961
NCBI-ProteinID:
XP_003570811
UniProt:
I1HWC1
LinkDB
All DBs
Position
3:complement(916778..918895)
Genome browser
AA seq
421 aa
AA seq
DB search
MTSRPSSSSHSPSSSSSSASAYQETSRRDEADGGGIAAANPAEDNEADELSPRGCEWEFR
LAATVPSPAMVGASDAIGSVDFDPSGSLLATAGIARKVRIYNAATLLLDQQSSSPAACIC
VPAKLSSVRWRPDSSSSGRFVGCGDYDGVVTEYDLDRGGAATWERDEHSGRRVWALDYSP
SSSMAASGSDDRTAHVWDPRSPAAGWATAKASGPVLCVEFDPSGAPRLAVGSADRRAALY
DVRNMGRGPVATAEGHARAVTYVRWAPGDRLVTSAADGTHRLWDWAAAGAQGMVGPGREV
RAYSGHVSGRSFVGMGLWRGPGLVACGSESNHVFVYDLRWPKPVWVHPFFVPSGDGGGGF
VSAVAWRQQAEDGGGGDAGVLVAGGSDGVLKLFTCRRRWRRLRDGEEEDDDPVEDVDGEH
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgaccagccgcccctcttcttcttctcattctccttcttcttcttcttcttccgcctcc
gcttaccaagaaacctcgcgccgggacgaagctgacggcggcggcattgctgctgctaat
ccggcggaggacaacgaagccgacgagctgtcgccgcgggggtgcgaatgggagttccgg
ctggcggcgacggtgccgtccccggccatggtgggcgcgtccgacgccatcggcagcgtc
gacttcgacccctccggctccctcctcgccaccgccggcatcgcccgcaaggtccgcatc
tacaacgccgccaccctcctccttgaccagcaatcgtctagccccgccgcgtgcatctgc
gtccccgccaagctcagcagcgtccgctggcgccccgactcctcctcctccggccgcttc
gtcggctgcggcgactacgacggcgtcgtcaccgagtacgacctggaccgcggcggcgcc
gccacctgggagcgcgacgagcactccggccgccgcgtctgggcgctcgactactcccct
tcttcctccatggcggcgtcgggttccgacgaccgcacggcccacgtctgggacccgcga
tccccggcggcgggctgggccacggcgaaggcttccgggcccgtgctctgcgtcgagttc
gacccgtccggcgccccgcggctcgccgtgggctccgcggaccggcgggcggccctctac
gacgtgcgcaacatgggccgggggcccgtggccacagcggagggccacgcgcgggccgtg
acgtacgtgcgctgggccccgggggaccggctcgtgacgtccgccgccgacgggacgcac
cggctctgggactgggccgcggctggggcccaggggatggttggcccggggagggaggtg
cgggcgtacagcgggcatgtgagtggcaggagcttcgtgggcatgggcctgtggcgcggg
ccgggcctcgtggcctgtgggtctgagtcgaaccatgtgtttgtctacgacctccgctgg
cccaagcccgtctgggtccaccccttcttcgtcccttccggcgacggcggtggcggattc
gtcagcgccgtcgcgtggcggcagcaggcggaagacggcggtggcggagatgccggggtg
ctcgtcgctggcgggtcggacggcgtgctgaagctgttcacgtgccgccggcgatggcga
cggctgagagacggcgaggaagaagatgatgacccggtggaagatgtggacggcgagcac
cagtag
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integrated database retrieval system
