Brachypodium distachyon (stiff brome): 100837005
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Entry
100837005 CDS
T01717
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100837005
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100837005
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
100837005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
RQC
CitX
Motif
Other DBs
NCBI-GeneID:
100837005
NCBI-ProteinID:
XP_003558758
UniProt:
I1H9F8
LinkDB
All DBs
Position
1:71776266..71787565
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AA seq
704 aa
AA seq
DB search
MEDEENIEEELLLVESELHGLQDKIKMLLDRQEELYERQSQLQALLEISKTSRDAASSAP
SVAPEDWSGKFSWDSQADDIRFNVFGISSYRSNQREIINSIMSGKDVLVIMAAGGGKSLC
YQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTNKEVEKLIYKALEKGEG
ELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILK
IQFPSVPMIALTATATSKVQMDLIEMLHIPRCVKFVSTVNRPNLYYKVYEKSSVGKVVID
EIANFITESYPNKESGIVYCFSRKECEQVAKELRERGIAADYYHADMDSVAREKVHMRWS
KSKSQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRAGRDGLPSECVLYYRPG
DVPRQSSMVFYENCGLQNLYDIVRYCQSKKSCRRGAFFQHFGEAVQECNGMCDNCASSIE
LKDIDATYHTKIIVSLLQDMQHNDQRATLLQLVDKFKTKWKHSGCSNEAVDLKKEEIEQL
IVQLIIDRVLKEEFQHTAYTTNAYVALGPLWKLALQGNRPVKLTGAIHSQDTGGASKSTK
RSQMSNLEAKLDDLRRTISSDNGGIFPHAVLSTQQISLLSSHKPTTIAELENLIGKVKAD
KYGSDIIEVMQSEIDGGKDSGENGAKRQKKDKDVVLVESSEEEA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaagaaaacatcgaggaagaacttttgctggtggagtcagaactccatggc
ctacaagacaaaatcaaaatgctacttgatcgccaagaagaattgtatgagcgccaatca
cagttgcaggctttgctagaaatatctaaaacttccagagatgcagcaagtagtgcccct
tcagttgctccggaagactggtccggaaagttttcatgggattctcaggctgacgacatt
cgatttaatgtatttggtatatcctcctacagatcaaaccaacgagaaataatcaactca
atcatgagtggaaaagatgttctggttataatggctgctggtggagggaagagcctatgc
tatcaacttccagctgtacttcgtgatggaattgcacttgtcgtcagtcctttgctttcg
cttattcaggaccaggtcatgggactgacagctttaggtataccagcgtacatgttaact
tccactaccaacaaggaagttgagaagttaatctataaggcacttgagaaaggtgaaggg
gaattgaagatattatacgtgacacctgaaaagatatccaaaagtaaaaggttcatgtct
aagcttgagaaatgccatcatgctgggcgtctttctcttgttgcaatagacgaggcacac
tgctgcagtcagtgggggcacgatttccgtccagactacaagaatctgggcattttgaag
atccagtttcccagcgttcccatgatagctttaactgcaactgcaacgagtaaagtgcaa
atggatttgatagagatgcttcatatccctagatgcgtcaagtttgtcagcactgttaac
aggcccaacctttactataaggtatatgagaaatcatcagttgggaaggttgttattgat
gagatcgcaaatttcataaccgaatcatatccaaataaagaatctggaattgtgtattgt
ttttctaggaaggaatgcgaacaggttgcgaaagaactgcgtgaaaggggtattgcagca
gattattatcatgcagatatggattctgttgctcgtgagaaagttcatatgcgttggagt
aaaagcaaatcacaggtcattgttggaacagtggcatttggaatgggaatcaacaaacca
gacgtcaggtttgtggttcatcatagccttagcaagtctatggagacatactaccaggaa
agtggtcgggcagggagagatggactaccttcagaatgtgttttgtactaccggcctggt
gacgttcctcgccagagttcgatggtcttctatgagaactgtggcctgcaaaatctgtat
gacatagtacgatattgtcagtctaagaaaagctgtcgtcgtggcgctttctttcaacat
tttggagaggctgtgcaggaatgcaacggaatgtgtgacaactgtgcttctagtattgag
ctcaaggacatcgatgctacctatcataccaaaatcatcgtttcacttctccaagacatg
caacataatgaccagagagctacattgctgcagctggtggataagttcaagacaaagtgg
aaacattcaggttgttcaaatgaagcagttgatcttaagaaggaagaaattgagcagttg
atagttcaacttataattgaccgtgttttgaaagaagaatttcagcatacagcatataca
accaatgcatatgttgccctaggaccactgtggaagctagcattgcaaggaaacagaccg
gtgaagctaactggtgccattcactctcaagatactggtggtgcatccaaaagtacaaag
cgtagtcagatgagcaatttggaagctaagcttgatgacctgcgtagaactatctcttct
gataatggaggcatattcccccatgcagttctgtccacgcagcaaatttccctgctaagc
agccataaaccaaccactatagccgagcttgaaaatcttatagggaaggtaaaggcggac
aagtacggcagtgatatcattgaggtgatgcagtcagaaatcgacggtggaaaggacagt
ggtgagaatggagctaaaaggcaaaagaaggataaagatgttgttttagttgagagtagc
gaggaggaagcctaa
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