KEGG   Brachypodium distachyon (stiff brome): 100837061
Entry
100837061         CDS       T01717                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100837061
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100837061
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 100837061
NCBI-ProteinID: XP_010230363
UniProt: I1HBA4
LinkDB
Position
2:609646..614456
AA seq 668 aa
MAAEAPPSSSSGARAPAASGGAASPETYLGSLISLTSKSEIRYEGVLYNINTEESSIGLR
NVRSFGTEGRKKDGIQIPASDKVYEYILFRGSDIKDLQVKSSPPPPQPQPAPLHNDPAII
QSHYPQAASASSSLPSAGGAVLPDLSSQAAQYGIQRPSFQSNIPLYQPGNVQWGSSGPPP
AGSVSALSVPPMYWQGYYAPPGLPPHLQQPPFLQSTPGLSVPQTLQYPGLNPSLPSGQQK
LSELQPPLLQPSASGQGPTSSITPATTAPSASLLGPDTSKPLLPNMVPLFTPPVPSHGAP
LPLASQPIPMTETSATASQSLASLVSSKTAVAPGSTLSKTAVVPGSTLSKTAVVPGSTLP
KTAVAPGSTLSYQTASQAISSTVASSTPAGMEMPAPLLASSGQLLQNAPSMLSSSQSMQT
PLHMSNSIGKPVDPKPKAAEPLLPDPPARALPENNEPILPLPKQTPQKYNGAGSHSQQQH
NFRGRGRGRGSAFSQSVTKFTEEFDFTAMNEKFNKDEVWGHLGKKSQSRDKDGELGDDVF
DEDLQYEETDNPELDVKPVYVKDDFFDSLSGGTFGRGGQNGRPRFSEQRKMDTETFGDFP
RHRQPYRGGGRGYRGGGGRSRGYYGGRGYGNTGRGGGQENYYGGGGYGNMGRGGQDNSYP
QRGSYGRG
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcggccgaagcgccaccgtcgtcgtcctcgggcgcgcgggcgccggcggcgtccggc
ggggcggcgtccccggagacgtacctcgggagcctcatcagcctgacctccaagagcgag
atcaggtacgagggcgtcctctacaacatcaacaccgaggagtcgagcatcggcttgcgc
aatgtgcgctcgtttggaactgaagggcggaagaaagacggaatacagattcctgctagc
gacaaagtttatgagtacatacttttccgcggaagtgatatcaaggatttgcaagttaaa
tcgtcaccaccgccaccacaaccgcaaccagctcccctgcacaatgaccctgccataatc
cagtcacattatcctcaggcagcatcggcctcttcaagtttgccttctgctggcggtgca
gttttaccagacctcagctctcaggcagctcaatatgggattcagaggccaagttttcag
agtaatattcctttataccaaccaggcaatgttcaatggggatcttctggtccacctcct
gctggaagtgtttcagcactttcagtccccccaatgtactggcagggctactatgcacct
ccaggccttccacctcacttgcagcaacctccttttcttcagtccacaccagggttatcg
gttccccagactctccagtacccaggactgaatccctctttaccatctgggcaacaaaaa
ctttctgaactgcagcctcccttgttgcaaccatctgctagtggtcaaggtcctacctca
agtatcacacctgctacaacagcaccttctgctagcttattaggtccagacacatcaaag
cctctgctgccgaacatggtaccgttgtttacccctccggtgccatctcatggtgcacct
cttcctttagctagtcagccaattcccatgactgaaactagcgcaacagcatcacagagc
ttagcttctcttgttagcagtaagactgccgtagcaccaggctcaacattgtccaagact
gctgtagtcccagggtcaacattgtctaagactgctgtagttccaggctcaacattgcca
aagactgctgttgccccaggctcaacattgtcataccaaacagcatctcaggcaatttct
tcgaccgttgcctcatctacccctgctggcatggagatgccagcacctttgttggcgtca
tcaggtcaactattgcagaatgctccatccatgctttcgtcatctcagtccatgcaaaca
cctctacatatgagcaacagtattggcaagcctgttgaccctaaaccaaaggctgctgag
cccttgctacctgatccaccggcacgtgctttgcctgaaaacaatgagcctatactacca
ttgccaaaacagacacctcaaaagtacaatggagctggttcacacagccagcagcagcac
aactttaggggccgtggaaggggtagaggcagtgcgttctcgcaatctgtaacaaaattt
actgaagaatttgatttcacggccatgaatgagaagttcaacaaagatgaagtctggggt
catcttggtaagaagtcccagtctagggacaaggatggtgagttgggagatgatgtgttt
gatgaagatctgcagtatgaggaaacagacaatccagagttggatgttaagcctgtttat
gtcaaggatgattttttcgattctctttctggtgggacatttggacgcggagggcaaaac
ggaagaccaaggttttcagaacagaggaaaatggacacagagacttttggtgatttcccg
aggcaccgccagccctatcgtggtggtggacgtggttaccgtggtggaggtggtcgttcc
cgtgggtactacggtggcagaggctatggaaatacgggaaggggtggtggccaggagaac
tactacggtggtggtggatatggtaacatgggcaggggtggccaggataactcttatcct
cagcgtggttcatatggaagaggttga

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