Brachypodium distachyon (stiff brome): 100837225
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Entry
100837225 CDS
T01717
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 6C
KO
K15191
La-related protein 7
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100837225
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
100837225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PAM2
HENMT1_C
U_exon
Motif
Other DBs
NCBI-GeneID:
100837225
NCBI-ProteinID:
XP_024318649
LinkDB
All DBs
Position
1
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AA seq
466 aa
AA seq
DB search
MAKETSDASSEAPPPTPMSAPASFKFNVHAPEFVPMSPTAAAASPMSAPASGYCSPFLAP
DWSFLHDHHEPVFFMPDFKFAAAAAAASNSAGQPKAGGGGGGAATAVDIAHKIVKQVEYQ
FSDINLVANEFLLKIMNKDSEGYVPLSVISSWKKIKSLGATNQMLVKALRTSTKLIVSDD
GKKVRRRQPFTEKHKEELQVTDLQCSRISLXYPELNLVFITQSRMIIAENLPEDSSRNSL
EKVFGVVGSVKNIKICHPQEPSSARASKSDTLVSNKMHALVEYETSQQAEKAVEKLNDER
NWRKGLRVRTVLRRSPKSVMRLKRPDFDHFAGSDDDSPHSQMSSDSPTSEAVHSPEAHPE
DHQSGAKKGWARGRGKLHVTAPHSPQSAPAGIVGHFDPSSPRQASQKSPLSPRQVSQKCP
FSPRQPPQGPRMPDGTRGFTMGRGKPPASSVTARTVGGPPPAPVLV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggagaccagcgacgccagctccgaggcgccaccgccgacgccaatgtcggcg
ccggcgtccttcaagttcaacgtgcacgcgccggagttcgtgccaatgtcgcccaccgcc
gccgccgccagccccatgtccgccccggccagcggctactgctcgccattcctggccccg
gactggagcttcctccatgaccaccatgagcctgtcttcttcatgcccgacttcaagttc
gccgctgccgccgccgccgccagcaacagcgctggccagcccaaggccggcggcgggggt
ggtggcgccgccaccgccgtcgacatcgcccacaagatcgtcaagcaggtcgagtaccag
ttcagcgacatcaacctcgtcgccaacgagttcttgctcaagatcatgaacaaagattct
gaaggttatgttcccttgtcggtcatttcatcctggaagaagatcaagtccctgggagca
accaaccagatgctggttaaggctcttcggacctccacaaaactgattgtcagcgacgat
ggcaagaaagtccggcgcaggcagcccttcacagagaagcacaaagaagagcttcaggtc
actgatttacagtgctccaggatttctctgncctacccagaactgaatcttgttttcatt
acgcagtctcgaatgatcatcgcggagaatttgccagaggactcctcaagaaacagcctc
gagaaggtcttcggcgtcgtcggaagtgtgaagaacatcaagatttgccaccctcaagag
cctagctcggcgagggcttccaagtcagacacactagtgagtaacaagatgcatgctctt
gtggaatatgagacctcgcagcaggcagagaaagcagttgagaagctaaacgatgaacgg
aactggaggaaaggcctccgagtgcgtacagtgttgaggcgttcccccaagtcagtaatg
cggctgaagcggcctgatttcgaccactttgctggctctgatgacgattcaccacactca
cagatgtcatctgactccccgacttcggaagccgtccattcgcctgaagctcatccagag
gatcaccagagtggagccaagaaagggtgggcaagagggcgaggaaagctgcacgtcacg
gcgccacacagcccacagtctgctcctgccggcatcgtcggccactttgacccatcaagc
cctcgccaggcatcccagaaatccccattgagccccaggcaggtttctcagaagtgccca
ttcagccccaggcagcccccgcagggcccgaggatgcccgacggaacacgcgggttcacc
atgggccgagggaagccaccagcatcatcggtgacagcccggacggtcggtggtcctcct
ccggctcctgttcttgtctag
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