Brachypodium distachyon (stiff brome): 100837227
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Entry
100837227 CDS
T01717
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100837227
Enzymes [BR:
bdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100837227
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100837227
Prokaryotic type
100837227
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100837227
NCBI-ProteinID:
XP_003561660
UniProt:
I1H5P7
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All DBs
Position
1:complement(62481456..62486424)
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AA seq
522 aa
AA seq
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MAVAAAAAATSFWLLRRPFSSTVLARYANPILTPLCFSHSASAPALASSTPAPPAPPLTT
CSGEGGGGLRWESTRKKRVVLRVGYVGSEYRGLQKQRELSADSTIESVLESAIFKAGGIL
ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALANFINSNLPNN
IKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSGCSSEEVEEHLIEFNSILKGFEG
NHPFHNYTARAKYRKVLAGAHRRSKETSSTINSIPSELAVDQSPNDDGATSDADDEHLNF
SSVVDSSLPENDWNKDNPKHHENHVQIQARWLHEPNENDRLSASHFRDIITCSCGELQSS
SGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKEIIELSLAKFSRIVLPIAPSEVL
ILRDNSFCTRNKQGSIVRPGIQSINESKEVKKGVMEFYKAALVPELAKYLDASEPPWEEW
VENLDHFTSIPDSQLDEVRTAYTAWREDYIRAKTARKSSGGG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccgccgccgccgccgcgacgtcgttctggcttctccgtagacccttctct
tctactgtcctcgcgcgctacgcgaatcctatccttacccctctatgcttctcgcactct
gcgtctgctcccgcccttgcctcttcaacaccagcaccgcctgcgcctccgcttaccacc
tgctccggcgaaggaggtggcggtctgaggtgggagtccacgcggaagaagagagtcgtg
ctccgcgtaggctacgtcggcagcgagtaccgaggtctccagaaacagcgagagctcagc
gcggattccaccattgagtcagtcttggaatctgccatcttcaaggcagggggcattctt
gagagtaattacggaaagctgcaaaaagttggttgggaaaggagtagccgaaccgataaa
ggggtacattcactggctacaatgatctctctgaagatggaaatccctgatcgagcatgg
gagaacgatcctgatggcatagctcttgcgaatttcattaactcgaatctaccaaacaat
atcaaagttttcagtatcttgcctgcgcaaaggagttttgatgtaaggagggaatgcttg
taccgggaatacttctatcttctccctgctgaaattatcggaattaaaagcggttgtagc
tctgaagaagtagaggagcacttgattgaattcaatagcatactgaaaggttttgagggg
aaccacccatttcataattacactgcccgtgcgaagtacaggaaagttctagctggagcg
caccgaaggtccaaggaaacaagctcaaccataaattccattccctctgaattggctgtg
gaccaaagccctaatgatgatggtgctacttcagatgcagatgatgaacacttaaatttt
tcgtcagtagttgattccagtttaccagaaaacgattggaataaggataatcccaaacat
catgagaatcatgtgcagattcaagctagatggctccatgagcctaatgaaaatgataga
ttaagtgcttcacacttcagagacatcatcacttgctcatgtggagagttgcagagttct
tcaggaattcaatttgttgaactgactatatgtggagtgtcttttatgctacatcagatc
cgcaagatggttggtactgctgtggcagtgaagcgtggattactaccgaaagagattata
gaactgtctctcgcaaagttttctcgcatcgtcttaccgatcgctccatctgaagttctg
atccttagagacaacagtttctgcacaaggaacaagcaaggcagcattgttcgccctggc
atccaatcgataaacgaatctaaagaagtcaagaagggagtaatggaattttacaaggca
gctcttgtgcctgagctggcaaaatacttggatgcatccgaacctccgtgggaggaatgg
gtggagaacttggaccacttcaccagcataccggattctcagttggatgaagttaggaca
gcgtatacagcatggagagaggattacattcgagcgaaaacggctcgaaagagttctggc
ggtggctga
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