Brachypodium distachyon (stiff brome): 100837258
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Entry
100837258 CDS
T01717
Name
(RefSeq) RNA-binding protein Y14A
KO
K12876
RNA-binding protein 8A
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
bdi03015
mRNA surveillance pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100837258
09122 Translation
03013 Nucleocytoplasmic transport
100837258
03015 mRNA surveillance pathway
100837258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100837258
03041 Spliceosome [BR:
bdi03041
]
100837258
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100837258
Spliceosome [BR:
bdi03041
]
Complex C
Other components
EJC/TREX
100837258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
100837258
NCBI-ProteinID:
XP_003568971
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All DBs
Position
2:complement(36791651..36794790)
Genome browser
AA seq
207 aa
AA seq
DB search
MAAAAMNTDVEAVDFDSDDDDLMDEEGAIEPSPAPAPRLRSTIAGGGGGGDGPRRTKGRG
FREDPNSSAAPRDSRLAGVGRSGFDALASDGGPGPVRSIEGWIVLVTGVHEEAQEDDLHN
IFRGFGEVKNLHLNLDRRTGFVKGYALIEYENFEEAQAAIKASDGTELLTQIISVDWAFS
NGPAKRRNTRKRSPRANRSRSPPRRRY
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgatgaacacggacgtggaggcggtggacttcgactccgacgacgat
gacctcatggacgaggaaggcgccatcgagccctcgccggcgcccgctccccgcctccga
tccaccatcgctggcggcggcggcggcggcgacgggccccgtaggaccaagggccgcggc
ttccgtgaggaccccaactcctccgccgcgccccgcgactcgcgcttagcgggcgtcggc
cgctctggcttcgacgccctcgcctccgatggcggccctggccctgtacggtccattgaa
gggtggattgtactggttactggagttcatgaagaagctcaggaagatgaccttcacaat
attttccggggctttggggaagtcaagaacttgcatttgaatttggatcgtcggactgga
tttgtgaagggatatgctctgattgaatatgagaactttgaagaagcccaggctgcaata
aaagcatcggatggaactgagcttcttacacaaataataagtgttgattgggcctttagt
aatggccctgccaaacgtagaaatactcggaagagatcaccgagggctaatcgctcaagg
agcccaccgaggagaagatattga
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integrated database retrieval system
