Brachypodium distachyon (stiff brome): 100837310
Help
Entry
100837310 CDS
T01717
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00750
Vitamin B6 metabolism
bdi01100
Metabolic pathways
bdi01240
Biosynthesis of cofactors
Module
bdi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
100837310
Enzymes [BR:
bdi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
100837310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
Motif
Other DBs
NCBI-GeneID:
100837310
NCBI-ProteinID:
XP_003558759
UniProt:
I1H9F9
LinkDB
All DBs
Position
1:complement(71787866..71789271)
Genome browser
AA seq
316 aa
AA seq
DB search
MASDGVVTLYGNNNKVVVEPSSKPASAATFSVKVGLAQMLRGGVIMDVVTAEQARLAEEA
GACAVMALERVPADIRAQGGVARMSDPALIRDIKRAVTIPVMAKARIGHFVEAQILEAVG
VDYVDESEVLTVADEAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMVRTKGEAGTGNV
VEAVRHVRSVMGDVRALRSMDDDEVFAYAKSIAAPYDLVMQTKQLGRLPVVQFAAGGVAT
PADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVEAVTHYSDPEILANVSAGLGEAMVG
INLNDPKVERYAARSN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgacggcgtggtgaccctgtacggcaacaacaacaaggtggtggtggagccg
tcctccaagcccgcctccgccgccaccttctccgtcaaggtgggcctggcccagatgctc
cgcggcggcgtgatcatggacgtggtgaccgcggagcaggcgcggctggcggaggaggcc
ggggcgtgcgccgtgatggccctggagcgcgtccccgccgacatccgcgcgcagggcggc
gtggcccggatgtcggacccggccctcatccgcgacatcaagcgcgccgtcaccatcccg
gtcatggcgaaagcccgcatcgggcacttcgtggaggcccagatcctggaggccgtgggc
gtggactacgtggacgagagcgaggtgctcaccgtcgcagacgaggcgcaccacatcaac
aagcacaacttccgcgtccccttcgtgtgcggctgccgcgaccttggcgaggcgctccgc
cggatccgggagggcgccgccatggtccgcaccaagggggaggccgggacggggaacgtc
gtcgaggccgtccgccacgtccgctccgtcatgggcgacgtccgcgcgctccggagcatg
gacgacgacgaggtcttcgcctacgccaagagcatcgccgcgccctacgacctcgtcatg
cagaccaagcagctcggccgcctccccgtcgtgcagttcgcggccggcggcgtcgccacg
ccggccgacgcggcgctcatgatgcagctggggtgcgatggcgtcttcgtcggctccggg
atattcaagagcggcgatccggcgaggcgtgctcgcgccattgtggaggccgtgacgcac
tacagcgacccggagatcctggccaacgtcagcgctgggctcggcgaggccatggtgggg
atcaacctcaacgaccccaaggtcgagcgctacgccgcccgctccaactag
DBGET
integrated database retrieval system
