Brachypodium distachyon (stiff brome): 100837329
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Entry
100837329 CDS
T01717
Name
(RefSeq) WD repeat-containing protein PCN
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100837329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100837329
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100837329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
100837329
NCBI-ProteinID:
XP_003560086
UniProt:
I1GNL4
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Position
1:complement(6822624..6829174)
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AA seq
815 aa
AA seq
DB search
MEKLRVHRCGGGAVAWTPSPIVALATSPCASQVAAARGDGSLELWLVSPGSVGWHHQLTI
HGSAQSMVTALVWVPSGAGGRLLSSSIDGSVAEWDLFHLKQKNVLDSVGVPVWQMAMEPT
DDPLNSENKSSGCASNGRANHNGRTDSDLSYVDDGDSFDDEDDSAKTSSPYRVNEFQRLA
LACDDGSVRLYNVPESGSLTYYRSLPRVSGRILSVTWSNNAKFIFSGSSDGLIRCWDSTS
FHEKYRMTAGLGGAGSGSEFCIWSLLFLRCGTLVSGDSSGTVQFWDSRHGTLLQAHSYHK
GDVNALATVPSQNRIFSAGSDGQVILYKASKDEFGADNEKVAKDQMHKWAYVGYVRSHSH
DVRALTMAVPICKEDAPPEEKVVKKIRQREKPVDSYHKWAHLGVPMLISGGDDTKLFAYS
AREFTQFAPHNFCPAPQRPLINLARDGTVNGDSVMLVQSANWLDVLLVSVQNNLIPSTSS
RGDATIRQVVRLKSKGSRKIVSSAISTNGMLLAYSDCVKPCLFALRHKGGKKYALDKVEL
PKGIPSSQSMMFTADSSNLVLACCDGKIYVVDIATKEISNVFHPTRKMDGEKPSSKEPPV
TKMFLSVDGQWVAAANCFGDVYIFNLEVQRQHWFIPRMNDGSVTSGGFCPKNNSLVITTS
KNEVYIFDVEAKQLGEWSKRYTHHLPRRFQEFPGEVIGLSFPPLSSSSVVVYSARAMCVI
DFGLPVVQDVQLSNGSVVPAEKINQQKGTKSKIKRKDRDEEMKLEKRNNFDFFAFKDPVL
FVGHLLDSSALIVEKRWMDVVEGFGPPVHRHIYGA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctccgcgtccaccgctgcggcggcggcgcggtcgcgtggacgccctccccc
atcgtcgcgctcgctacctctccctgcgcctcccaggtcgcggccgcgcgaggcgacggt
tccctcgagctctggctcgtctcccccggctccgtcgggtggcaccaccagctcactata
catgggagcgcgcagtcaatggtcacggcgcttgtgtgggtgccgagcggcgcagggggg
cggttgctctcttccagcatcgatggttcagttgcagaatgggatctcttccaccttaag
caaaagaatgtcctagattctgttggtgtaccagtctggcagatggccatggaacctaca
gatgatcctttgaattctgaaaataaaagctcaggatgtgcttccaatggccgtgcaaat
cataatggccgcactgactctgacttaagttatgtcgatgatggtgatagctttgatgat
gaagatgattctgccaagacaagctctccatatcgtgtgaatgaattccagcgtttggcc
ctggcatgtgatgatggttctgtacgcttgtataatgtgcctgaatctgggtcattaact
tactatagatctcttccaagagtaagcggacgcattttgagtgtgacatggagtaataat
gccaagttcatattttctggaagcagtgatgggttaattagatgctgggattcaacatct
ttccatgaaaagtatcgcatgactgctggattaggaggtgctggtagtgggagtgaattt
tgcatatggtcattactgtttctgaggtgtggaacccttgttagcggagatagttctggg
acagttcagttttgggatagccgccatggaactcttttgcaagctcactcttatcataaa
ggcgacgtcaatgcactagcaactgtgcctagtcagaaccggatattttctgcaggatct
gatgggcaggtaattttgtacaaggcgtcgaaagatgagtttggtgctgataatgagaag
gtggccaaagatcaaatgcacaagtgggcctatgtaggatatgtgagatcccattctcat
gatgttagggcattgaccatggcggtaccaatttgcaaagaagatgctccaccagaggaa
aaagtagtgaagaagatacgccagcgcgaaaaacctgttgacagttaccacaaatgggca
catctgggtgtgcctatgctgatttctggtggtgatgacaccaagctgtttgcttattct
gcgagggagtttactcaatttgcccctcataatttctgccctgcacctcaacggccattg
ataaatctggcaagagatggcacagttaatggagattctgtgatgcttgtccagtctgcc
aattggttggatgttttacttgtgtcagttcagaacaatctgattcctagtacgtcatcc
agaggagatgctacaatacgacaagttgttcgtctgaaaagcaaggggtcccggaaaatt
gtttcaagtgccatctctaccaatggaatgctattggcttattctgattgtgtgaagccc
tgcctttttgcgttgaggcataagggcggaaaaaagtacgctctagacaaagtagagttg
ccaaaaggaatacctagttctcagagtatgatgtttaccgctgactcatccaatctggta
ctagcttgttgtgatggaaaaatatatgttgtggatattgcgacaaaagaaatttcaaat
gtatttcacccgactagaaagatggatggagaaaaaccttcttccaaagaaccaccggtc
acaaaaatgttcctgagcgtggatggtcagtgggtggctgcagctaactgctttggggat
gtttacatatttaaccttgaagtgcagaggcagcactggttcataccgagaatgaatgat
ggttcagttacatctggtggcttttgtcccaaaaataattcccttgtcataactacatct
aaaaacgaggtgtacatatttgacgtagaagcaaagcaattaggcgaatggtcaaagcgc
tatacacatcatttgcccagaagattccaagaatttcctggagaggtcattggtctctca
tttcctccactaagttcatcttcagttgtggtatacagtgcaagggcaatgtgtgtcatt
gattttggattgccagttgttcaggatgttcaactgtcaaatggttcagttgtaccagca
gaaaagataaaccaacaaaagggtacaaaatccaagattaagcggaaggatcgtgacgaa
gagatgaaactagagaaaaggaataactttgacttctttgcgttcaaagatccagtgctg
tttgttggtcacctattggacagttcagctttaatagttgagaagcgatggatggatgtt
gttgaaggttttggcccaccggttcatagacacatatatggggcatga
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