Brachypodium distachyon (stiff brome): 100837382
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Entry
100837382 CDS
T01717
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100837382
09122 Translation
03015 mRNA surveillance pathway
100837382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100837382
Spliceosome [BR:
bdi03041
]
Complex A
Other components
Complex A specific factors
100837382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
100837382
NCBI-ProteinID:
XP_003569057
UniProt:
A0A0Q3IR60
LinkDB
All DBs
Position
2:2778612..2783457
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AA seq
485 aa
AA seq
DB search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NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtcgtacggatccgacgactaccgcggcggcggcggaggtggctatggcggc
cgaggtggcggcggcggaggcggtcgtgggcgaggaggccccggaggatatggcggcagc
ggtggcggcggtggggcatatggaggtggcagtggcggagggtacggcggtggggggaga
ggtggtggtggagggggaggaggctatggcggcggtggcggaggcggcgggagaggtggc
gggcgcgggggaggacgcgatggcgactgggtttgccctgacgcgagctgtggtaacgtg
aactttgcaaggaggactgagtgcaataagtgtggggcacagtgccctagtggtggtggc
ggtggtggtggcggtggcggtgggtacgataggtctggtggaggaggtggagggtacaat
cgtggtggtggtgatcatggttcaggaggtggtggtggctacagcagaggtgatggggat
tacagctctggtggtcgtggtggtagtgctggtggaggaagaggagggtataatcgtgat
ggtggtagcggtcgtggttttgacgactaccgtgctggcggtggttacggtggaagagac
caagataacaatcaaaggggagataaagattcctttggtgacggtggctatggacaggcg
ccccctaaaggtcctccatcctatggcgggcctgcaggtgactatgcaccgcccccaagt
tcctatggaggcaacaatgtgtacagctcggattctgcagtgcctccccctaatagctat
ggaggtggtcgaggatcttacccaccaagctatggtgccccacctccaaacccatatagt
ggtggtgcacctgggggtgcaggaggcctgccgcctacatatgatggtgggtatggtggt
cggtctatgcctgggggtggaggcacaggtggtgcaccgccaccttatcaaggtggcggc
ggcggtggttacagcaacaatgctacccctgaaccagctacgaaggttaagcagtgtgat
gcaaactgtgatgattcctgtgacaatccaaggatatacatatcaaacctgcctcctgat
gtgactgttgaggaactgcaagagctttttggaggaattggccaggttggaaggatcaag
caaaaacgtggctacaaagaccagtggccctggaacataaaactctacactgatgattct
ggaaaacccaaaggagatgcttgccttgcttatgaagatccttctgctgctcatgcagca
ggcggattctacaacaattatgaaatgagaggccataaaataagtgttgtgatggccgag
aaatcagcacctagagctcctacatctggtcatgggggtggacgtggtggcggctatggt
ggggatagacgcagggacggaggaggccatggacctaatagaaaccagggtggtggttcg
cgtgcaaggccatactga
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