Brachypodium distachyon (stiff brome): 100837414
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Entry
100837414 CDS
T01717
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100837414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100837414
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100837414
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100837414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100837414
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100837414
Messenger RNA biogenesis [BR:
bdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100837414
Chaperones and folding catalysts [BR:
bdi03110
]
Heat shock proteins
HSP60 / Chaperonin
100837414
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100837414
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100837414
Exosomal proteins of other body fluids (saliva and urine)
100837414
Exosomal proteins of breast cancer cells
100837414
Exosomal proteins of colorectal cancer cells
100837414
Exosomal proteins of bladder cancer cells
100837414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
100837414
NCBI-ProteinID:
XP_003557154
UniProt:
I1H1D0
LinkDB
All DBs
Position
1:49082452..49087858
Genome browser
AA seq
599 aa
AA seq
DB search
MASTLSATSTVGLMATGIASDKKSSSLSSVSSISLASRPRNVRLQRKCNFRVKAAKELYF
NKDGSATKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPV
ENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVIAAGANPVQITRGIEKTAKA
LVEELKKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENNL
YVVEGMQFDRGYISPYFVTDSEKMTTEYENCKLLLVDKKITNARDLINVLEEAIRGQYPI
LIIAEDIEQEALATLVVNKLRGSLKICAIKAPGFGERKTQYLDDIAILTGGTVIRDEVGL
SLDKADKSVLGTAAKVVLNKESTTIVGDGSTQEEVSKRVAQIKNLIEVAEQDYEKEKLNE
RIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVD
AIKDTLENEEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNVKFGYNAATGQ
YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPLANPMDNSGFGY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacattgagtgccacttctactgttggcctcatggcaactggtattgcatca
gataagaagtcatcttcactatcttcagtatcatctatctcccttgccagccggccacga
aatgtgcgccttcagaggaaatgcaacttcagagtaaaagcagctaaggagctgtacttc
aacaaggatggctcagctaccaagaagctccaggctggagtcaataagctcgcagacctt
gttggagttaccttgggaccaaagggaaggaatgttgttttggagagcaagtatgggtcc
cctaagattgtcaatgatggtgttacagttgcaagagaggtcgagctggaggatcctgtt
gaaaatattggagcgaagctggttaggcaagctgcagcaaagaccaatgacttggctgga
gatgggacaactacttctgtggtccttgctcagggtctcattgctgagggtgtgaaggtt
attgcagccggtgctaatcctgtgcaaattacccgtggtatcgagaaaacagcgaaagca
ctagttgaggaattaaagaagatgtcaaaggaggttgaagatagtgagcttgcagatgtt
gctgcggtcagtgctggcaacaactatgaaatcggtaacatgatagcagaggctatgagc
aaggttggacggaagggagtggttacccttgaagaagggagaagttctgaaaataatctc
tacgttgtggagggaatgcagtttgaccgtggttatatctctccttatttcgtaactgac
agtgagaaaatgaccacagagtatgagaactgcaagctgcttttggtggacaaaaagatt
accaacgcaagggatcttataaatgttctggaggaagccatcaggggtcaatacccaatt
ctgataattgctgaggatattgagcaggaggctctcgctacccttgttgtcaacaagctt
agaggatctctgaagatctgtgctatcaaagcccctggttttggagagcgcaagacccag
tacctggatgatattgccatactgactggaggaactgtcatcagagatgaggtgggcctg
tcacttgacaaggcagacaaatcagttctaggaacggctgcaaaggttgtccttaacaaa
gagtcaacgacaattgttggtgacggcagcacccaggaagaagtgtctaagagggttgca
cagatcaaaaatctcatcgaggtagcagaacaggattatgaaaaggaaaaactcaatgag
aggattgcaaagcttgctggtggtgttgctgtcattcaggtgggagcacaaacagaaacc
gaacttaaagagaaaaagttgagagttgaggatgctctaaatgcaactaaggcggccgtg
gaggaaggtattgttgttggtggagggtgcactcttttgagactggcggctaaagttgat
gccatcaaggacactctggagaacgaggagcagaaggttggagctgaaatagtgagaagg
gccctgtgctacccacttaaattgatcgctaagaatgctggtgtcaatggcagtgttgtc
actgagaaggttctcagtaacgataacgtcaagtttggctacaatgctgctactgggcag
tacgaggacttgatggctgctggtatcattgaccccactaaggtggtgagatgttgcctg
gagcacgccgcgtctgtggccaagacgttcctcacatcggacgtggtggtcgtggagatc
aaggagcctgagcctgcgccgcttgccaaccccatggacaactctggcttcggatactga
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