Brachypodium distachyon (stiff brome): 100837874
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Entry
100837874 CDS
T01717
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X2
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03082
ATP-dependent chromatin remodeling
bdi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100837874
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100837874
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100837874
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100837874
03036 Chromosome and associated proteins [BR:
bdi03036
]
100837874
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100837874
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100837874
SWI/SNF complex
100837874
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100837874
PBAF complex
100837874
SWI/SNF complex
100837874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
100837874
NCBI-ProteinID:
XP_003568973
UniProt:
I1HM45
LinkDB
All DBs
Position
2:36858407..36863041
Genome browser
AA seq
238 aa
AA seq
DB search
MKTVSLSAPTRSSTVKFRMPTRDNLVPIRVDVEVDGQRYRDAFTWNPRDPDSEIISFAKR
TAKDLKLPASFVPQMLQSIQGQLAEFRSYEGQEMQIKEKIMPLKIDLRVNNTLVRDQFLW
DIGNLDSDPEEFARTLCDDLNITDPEVGPAIAVSIREQLYEIASQSVSAMREAKVSKKRR
APEFASNSKAMNNAVDMFKYFGSKGSVIRKRKEWYLYAPVVDVVPNEEVVVVDTTEGA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtgagccttagcgcccctaccaggtcctccaccgtcaagttccgcatgccg
acgagggacaacctggtgccgatacgcgtcgatgtggaggtggacggccagcgctacagg
gacgccttcacctggaacccccgcgatcccgactcagaaatcatcagcttcgccaagagg
acggcgaaggacctcaagctgccggccagtttcgtcccccagatgctccagtccatccag
gggcaattggcggagttccgttcctatgaggggcaggagatgcagatcaaggagaagatt
atgcccctcaagattgacctccgggtgaacaatactttagttagagaccaattcttgtgg
gatataggcaaccttgacagtgatcccgaggaattcgcgaggacattatgtgacgatttg
aacattactgatcctgaagttgggcctgccatagctgtttctatccgtgagcagctttat
gagattgctagtcaaagtgtttctgctatgagagaagctaaagtttcaaagaaaaggcga
gcaccagaatttgcttcaaatagtaaagccatgaataacgcagtggacatgttcaagtat
ttcggcagcaaaggaagcgttatccggaaacggaaggagtggtacctgtacgcacctgtt
gtagatgttgtacctaacgaggaagttgttgttgtggatacgacagaaggtgcttaa
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