Brachypodium distachyon (stiff brome): 100837884
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Entry
100837884 CDS
T01717
Name
(RefSeq) coatomer subunit beta'-2
KO
K17302
coatomer subunit beta'
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100837884
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100837884
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100837884
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100837884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
TPR_8
TPR_2
Clathrin
TPR_12
WD_LRWD1
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_LRRK2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100837884
NCBI-ProteinID:
XP_010234028
LinkDB
All DBs
Position
3:complement(6103894..6115629)
Genome browser
AA seq
921 aa
AA seq
DB search
MAMMWQPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEV
TDLPVRSAKFIARKQWVVAGADDMHIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVL
SSSDDMLIKLWDWDKGWACTHVFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWSIGSP
DPNFTLDGHSKGVNCLDYFTGGDRPFLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAV
CFHPELPIIITGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRIVIGYDEGTI
MIKIGREVPVASMDNSGKIIWAKHNEIQTVNIKTVGAGNEIADGERLPLAVKELGSCDLY
PQSLRHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAIRESTSRIKIY
SKNFQERKSIRPTFSVERVFGGVLLAMCTNDFICFYDWADCRLIRRIDVNVKNLYWADSG
DLVTVASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLWVGDCF
IYNNSSSRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEY
KTLVLRGDFDRANEVLPSIPKEQYDSVAHFLESRGMLEEALEIATDLNYRFDLAVQLGRV
DDAKAIALEVQSESKWKQLGELAISTGKLEMAEECLQHAMDLSGLLLLYSSTGDAEGITK
LASMAKEQGKNNVAFLCLFMLGKLEECLQLLIESNRIPEAALMARSYLPSKVPEIVALWK
KDLQKVNSKAAESLADPDEYPNLFEDWQIALNVEATVAPKRGIYPPAGEYLIHAERSNES
LVEAFKNMHVHEEDDVHEEDDVHEEEVLTNENDTVHEVIEDDGAEESQEDAVEVDADGST
DGTIHVNGNDSEEQWVLTPDH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggccatgatgtggcagccgctccggttggatatcaagaggaagctcgcgcagaggtcg
gagcgggtcaagtctgtggatctgcatccgacagagccatggattttgtcaagtctctac
tcggggagtgtctgcatctggaactaccagacgcagacaatggtgaaatcatttgaagtc
acagatttaccagttcgttcggctaaatttattgcacgaaagcaatgggtggttgctggt
gctgatgatatgcatatccgtgtgtacaattacaatacaatggataaggtcaaggtattt
gaagctcataccgattacatcaggtgtgtggctgttcatccaacccagccttttgtgttg
tcatcatctgatgacatgctgatcaagctttgggattgggataagggttgggcgtgcact
cacgtatttgaggggcattctcattatgtgatgcaagtcacatttaacccaaaggatacc
aatacttttgctagtgcatctcttgatcgcacaataaagatatggagtattggttctcct
gatcccaacttcacgttagatggccattcaaaaggcgtgaactgtcttgattacttcact
ggtggtgatcgcccatttttaattactggctctgatgatcagactgcaaaggtttgggac
taccaaacaaagagctgtgttcaaacacttgaaggacatgcacacaatgtctcagctgta
tgtttccatccagaattacctataataattactggttcagaggatggtacggttcgcttg
tggcactctactacctacagacttgagaacactcttaactatggccttgagcgagtttgg
gctttaggatacatgaagggatcaagaagaattgtgattggttacgatgaggggacaatt
atgataaaaatcgggcgtgaagtaccggttgctagcatggataacagtggaaaaatcata
tgggcgaaacacaatgaaattcaaactgttaatatcaagactgttggggcaggcaacgag
attgcagatggtgagcgattaccattggctgtgaaggagttgggaagctgtgatctttac
ccacaaagcttaaggcacaatccgaatgggagatttgttgttgtatgtggagatggagaa
tacataatttataccgcactagcatggaggaatagatcttttgggtctgctcttgaattt
gtttggtcgtctgacggtgaatacgcaatcagagaaagcacatcaaggataaagatatac
agtaaaaatttccaggagaggaaaagtataaggccaacattctccgtagaacgtgtattt
ggtggagtattactggctatgtgtacaaatgacttcatctgcttttacgactgggcagat
tgcaggttgatacgtcgaatcgatgtcaatgtgaaaaatctctactgggctgacagtggt
gatttagtgactgttgcaagtgatacatcattctacattttgaagtacaacagggatgta
gtatcttctcatttggatggagggggttcagttggcgaggaaggtgtggaagatgccttc
gaactgcttcatgagataaatgaacgcatccgaactgggctatgggttggcgattgtttt
atctacaacaattcgtcatcgcggcttaattactgtgttggaggagaggtcaccaccttg
tttcacttggaccgaccgatgtatttactaggatatcttgctaaccagagccgtgtctat
cttattgacaagcagtttaatgttgttgggtacacgttactcctcagtttgatcgagtat
aaaacacttgtactgcgtggggattttgatcgtgcaaatgaagttttgccctctatacca
aaggaacaatatgacagcgtcgcacatttcttggaatcacggggcatgttggaggaagcc
cttgagattgcaacagacttgaactacagatttgacctggcagtgcagcttggtcgagtc
gatgatgcaaaggccattgctcttgaggtgcaaagtgagtccaagtggaagcagttaggg
gagttagctatctcaactggaaagctcgagatggcagaggagtgtcttcaacatgccatg
gacctcagtggtctattgcttttgtactcatccactggggatgctgaagggataacaaaa
ttggcgtcaatggctaaagaacaaggaaagaacaatgttgccttcctttgtttgttcatg
ttaggcaagttggaggaatgccttcaattgttgattgaaagcaatcgtattccggaagca
gcattgatggcgagatcttatcttccgagcaaagtccctgagattgtagcattatggaaa
aaagatctccaaaaagtaaactcaaaagcagcagagtcattggcagatcctgatgagtac
ccaaacttatttgaagactggcagattgctcttaatgtagaagctactgttgcgcctaaa
aggggtatctatccacctgccggggagtacttgattcacgctgaaaggtccaacgaaagt
cttgtggaagctttcaaaaatatgcatgtgcatgaagaggatgatgtacatgaagaagac
gatgtacatgaggaggaggtgctaacaaatgaaaatgatactgttcacgaggttattgaa
gatgacggagcagaagagagccaggaagatgctgttgaggttgatgctgatggttcaact
gatggcaccatccatgtgaatggaaatgatagtgaggaacagtgggtgctgactcctgac
cactag
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