KEGG   Brachypodium distachyon (stiff brome): 100837884
Entry
100837884         CDS       T01717                                 
Name
(RefSeq) coatomer subunit beta'-2
  KO
K17302  coatomer subunit beta'
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100837884
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdi04147]
    100837884
Membrane trafficking [BR:bdi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100837884
Exosome [BR:bdi04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100837884
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 TPR_8 TPR_2 Clathrin TPR_12 WD_LRWD1 Beta-prop_WDR35_TULP_N TPR_GEMI5 Beta-prop_LRRK2 HEAT_GCN1
Other DBs
NCBI-GeneID: 100837884
NCBI-ProteinID: XP_010234028
LinkDB
Position
3:complement(6103894..6115629)
AA seq 921 aa
MAMMWQPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEV
TDLPVRSAKFIARKQWVVAGADDMHIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVL
SSSDDMLIKLWDWDKGWACTHVFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWSIGSP
DPNFTLDGHSKGVNCLDYFTGGDRPFLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAV
CFHPELPIIITGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRIVIGYDEGTI
MIKIGREVPVASMDNSGKIIWAKHNEIQTVNIKTVGAGNEIADGERLPLAVKELGSCDLY
PQSLRHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAIRESTSRIKIY
SKNFQERKSIRPTFSVERVFGGVLLAMCTNDFICFYDWADCRLIRRIDVNVKNLYWADSG
DLVTVASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLWVGDCF
IYNNSSSRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEY
KTLVLRGDFDRANEVLPSIPKEQYDSVAHFLESRGMLEEALEIATDLNYRFDLAVQLGRV
DDAKAIALEVQSESKWKQLGELAISTGKLEMAEECLQHAMDLSGLLLLYSSTGDAEGITK
LASMAKEQGKNNVAFLCLFMLGKLEECLQLLIESNRIPEAALMARSYLPSKVPEIVALWK
KDLQKVNSKAAESLADPDEYPNLFEDWQIALNVEATVAPKRGIYPPAGEYLIHAERSNES
LVEAFKNMHVHEEDDVHEEDDVHEEEVLTNENDTVHEVIEDDGAEESQEDAVEVDADGST
DGTIHVNGNDSEEQWVLTPDH
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggccatgatgtggcagccgctccggttggatatcaagaggaagctcgcgcagaggtcg
gagcgggtcaagtctgtggatctgcatccgacagagccatggattttgtcaagtctctac
tcggggagtgtctgcatctggaactaccagacgcagacaatggtgaaatcatttgaagtc
acagatttaccagttcgttcggctaaatttattgcacgaaagcaatgggtggttgctggt
gctgatgatatgcatatccgtgtgtacaattacaatacaatggataaggtcaaggtattt
gaagctcataccgattacatcaggtgtgtggctgttcatccaacccagccttttgtgttg
tcatcatctgatgacatgctgatcaagctttgggattgggataagggttgggcgtgcact
cacgtatttgaggggcattctcattatgtgatgcaagtcacatttaacccaaaggatacc
aatacttttgctagtgcatctcttgatcgcacaataaagatatggagtattggttctcct
gatcccaacttcacgttagatggccattcaaaaggcgtgaactgtcttgattacttcact
ggtggtgatcgcccatttttaattactggctctgatgatcagactgcaaaggtttgggac
taccaaacaaagagctgtgttcaaacacttgaaggacatgcacacaatgtctcagctgta
tgtttccatccagaattacctataataattactggttcagaggatggtacggttcgcttg
tggcactctactacctacagacttgagaacactcttaactatggccttgagcgagtttgg
gctttaggatacatgaagggatcaagaagaattgtgattggttacgatgaggggacaatt
atgataaaaatcgggcgtgaagtaccggttgctagcatggataacagtggaaaaatcata
tgggcgaaacacaatgaaattcaaactgttaatatcaagactgttggggcaggcaacgag
attgcagatggtgagcgattaccattggctgtgaaggagttgggaagctgtgatctttac
ccacaaagcttaaggcacaatccgaatgggagatttgttgttgtatgtggagatggagaa
tacataatttataccgcactagcatggaggaatagatcttttgggtctgctcttgaattt
gtttggtcgtctgacggtgaatacgcaatcagagaaagcacatcaaggataaagatatac
agtaaaaatttccaggagaggaaaagtataaggccaacattctccgtagaacgtgtattt
ggtggagtattactggctatgtgtacaaatgacttcatctgcttttacgactgggcagat
tgcaggttgatacgtcgaatcgatgtcaatgtgaaaaatctctactgggctgacagtggt
gatttagtgactgttgcaagtgatacatcattctacattttgaagtacaacagggatgta
gtatcttctcatttggatggagggggttcagttggcgaggaaggtgtggaagatgccttc
gaactgcttcatgagataaatgaacgcatccgaactgggctatgggttggcgattgtttt
atctacaacaattcgtcatcgcggcttaattactgtgttggaggagaggtcaccaccttg
tttcacttggaccgaccgatgtatttactaggatatcttgctaaccagagccgtgtctat
cttattgacaagcagtttaatgttgttgggtacacgttactcctcagtttgatcgagtat
aaaacacttgtactgcgtggggattttgatcgtgcaaatgaagttttgccctctatacca
aaggaacaatatgacagcgtcgcacatttcttggaatcacggggcatgttggaggaagcc
cttgagattgcaacagacttgaactacagatttgacctggcagtgcagcttggtcgagtc
gatgatgcaaaggccattgctcttgaggtgcaaagtgagtccaagtggaagcagttaggg
gagttagctatctcaactggaaagctcgagatggcagaggagtgtcttcaacatgccatg
gacctcagtggtctattgcttttgtactcatccactggggatgctgaagggataacaaaa
ttggcgtcaatggctaaagaacaaggaaagaacaatgttgccttcctttgtttgttcatg
ttaggcaagttggaggaatgccttcaattgttgattgaaagcaatcgtattccggaagca
gcattgatggcgagatcttatcttccgagcaaagtccctgagattgtagcattatggaaa
aaagatctccaaaaagtaaactcaaaagcagcagagtcattggcagatcctgatgagtac
ccaaacttatttgaagactggcagattgctcttaatgtagaagctactgttgcgcctaaa
aggggtatctatccacctgccggggagtacttgattcacgctgaaaggtccaacgaaagt
cttgtggaagctttcaaaaatatgcatgtgcatgaagaggatgatgtacatgaagaagac
gatgtacatgaggaggaggtgctaacaaatgaaaatgatactgttcacgaggttattgaa
gatgacggagcagaagagagccaggaagatgctgttgaggttgatgctgatggttcaact
gatggcaccatccatgtgaatggaaatgatagtgaggaacagtgggtgctgactcctgac
cactag

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