Brachypodium distachyon (stiff brome): 100837925
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Entry
100837925 CDS
T01717
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100837925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100837925
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100837925
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100837925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100837925
NCBI-ProteinID:
XP_003559018
UniProt:
I1HAS0
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All DBs
Position
1:complement(74442817..74444569)
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AA seq
329 aa
AA seq
DB search
MAKFSFDDADEDPPAAAAAGAGGDKRKREGSAAADGADGGGPPPTSKARNSAVVGGERDG
RAVVGASCCERRVDGDGEPGTGGISMRIDTDLLDCSICFEPLSPPLYQCQNGHVACFSCW
SRLSNKCHVCSHDAIFARNIALEKIVESIKSSCAYAKWGCSKLVSYAQRSVHEEACLFAP
STCPIPGCGYRGFTGCWSGHFLVDHSADCLHFTYGQSFEVNLAVSLPFLVLLGEDDHLFL
LLNKNMMPFGHAFTVVCLRNGNLNWNFSYEIEAASRGNPGNCLRLKASVTNTKEWGGLHP
AEAFLLVPYAFCSSANQTLSVSVARSASV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttctccttcgacgacgccgacgaagaccctccggctgccgccgctgccggt
gccgggggcgacaagaggaaacgtgaaggaagcgctgctgccgacggcgcggacggcgga
ggaccacccccgacctccaaggcccggaattccgcggtcgtgggcggcgagcgcgatggg
cgggcggtggtcggggccagctgctgcgagcggagggtggacggagacggagaacccgga
accggagggatcagcatgcggatcgacacggacttgctcgactgctccatctgcttcgag
cccctctctcctcccctctaccagtgccaaaatggccacgtagcatgcttttcctgctgg
tccaggctcagcaataagtgtcatgtttgttctcatgatgccatctttgcacgaaacatt
gcattggagaagattgtcgagtcaatcaagtcctcctgcgcatatgccaagtggggttgt
tccaagttggttagctatgcacaaagaagtgtgcacgaagaagcttgcctctttgctcct
tcgacgtgccctattcctgggtgtggatatagaggcttcacaggatgttggtcaggacat
ttccttgttgaccatagtgctgactgcttgcatttcacctatggccagtcgtttgaagta
aatttggcggtgtcccttcctttcctagttcttcttggagaggacgatcacctcttcctc
ctcctaaacaagaacatgatgccctttgggcatgcattcacagtggtttgcctcaggaat
ggcaatctgaattggaatttctcgtacgaaatcgaagcagctagcaggggaaaccctgga
aactgcctgagactgaaggcctctgttacgaatacgaaggagtggggaggtctgcaccct
gcagaagcgtttcttttggttccatacgccttctgcagttcagctaaccaaacactcagt
gtctccgttgcgaggtctgcttctgtatga
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