Brachypodium distachyon (stiff brome): 100837992
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Entry
100837992 CDS
T01717
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100837992
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100837992
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100837992
03036 Chromosome and associated proteins [BR:
bdi03036
]
100837992
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100837992
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100837992
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100837992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
100837992
NCBI-ProteinID:
XP_003569307
UniProt:
I1HP46
LinkDB
All DBs
Position
2:42934593..42941509
Genome browser
AA seq
503 aa
AA seq
DB search
MNGAATPEPKAASTSPTPQVPLEWRFSQVFGERGAGEDVQDVDIISTIEFNKSGHHLATG
DRGGRVVLFERTDAKDDAPRKEAEKADYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEK
INKIKWCQGTNGASFLLSTNDKTIKFWKVQEKKVKKICEMNLDPSNAPANGSPAGNNMVG
PSTRIPNGGFLRPGGPPLLRLPVVTSQEISLAANCRRVYAHAHDYHINSISNNSDGETFI
SADDLRINLWNLEISNQSFNIIDVKPTNMEDLTEVITCAEFHPSHCNTLAYSSSKGSIRL
VDLRQSALCDTHSQLFEQHEAPGSRSFFTEIIASISDIKFSKDGRHILSRDYMTLKLWDV
NMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCQSGDGLQVATGSYSNIFRVFNCGA
GGSEVTTLEATRNPTRRQIQNPARPARSLSSLTRVVRRGAENTGIDANGNSYDLSTKLLH
LAWHPDENLIACAAANSLYMYYA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggcagcgactcccgagcccaaggcggcctccaccagcccgaccccccaggtg
ccgctcgagtggaggttctcgcaggtcttcggcgagcgcggagccggcgaggacgtccag
gacgttgacatcatctcgacaatagaattcaataaatcaggacatcatcttgccactggg
gacagagggggacgagttgttttatttgaaagaacagatgctaaagatgacgcccctagg
aaagaggctgagaaagctgattattctatcagcaggcatcctgaatttcgctacaaaaca
gagtttcaaagccatgaaccagagttcgattatcttaaaagcttggaaattgaagagaag
attaacaagataaagtggtgccaaggaacgaatggtgcatcatttctgctgtcaacaaat
gacaagacaataaaattttggaaggttcaagaaaagaaggttaagaagatatgtgagatg
aatttggacccttcaaatgctcctgctaatggtagccctgctggcaataatatggttggt
ccaagcacgcgcataccaaatggtggatttttaaggcctggtggacctcctttactccgc
ctgcctgtggttacaagccaagaaataagtctcgctgctaattgccgtagagtctatgct
catgcacatgactaccatatcaattccatttccaataacagtgatggcgagacattcata
tcagcagatgatttgcggataaacctttggaatttggaaattagcaatcaaagttttaat
attatcgatgttaaaccaacgaacatggaggatctcactgaggtgataacatgtgcggag
ttccacccttctcactgtaatacattggcatatagtagctcaaagggctccattcgactt
gttgacctgcggcaatcagctctttgtgatactcattcccaactctttgagcaacatgag
gccccaggttcaagatcattttttactgagattatagcctcaatttcggacataaagttc
tccaaggatgggagacatattctgagtcgtgactacatgactctgaagctttgggatgtt
aatatggattctggtccagttgcgacgttccaggttcacgagtatctaaggcctaagtta
tgtgatttatatgaaaatgactcaatttttgacaaatttgagtgttgtcaaagtggagat
gggttgcaagtagcaactggttcttacagcaatattttccgtgtgttcaattgtggcgct
ggtggcagtgaggtaacaacgcttgaagcaactcgtaaccctacaaggaggcagatccag
aatcctgcacggcctgcaagatctctaagtagcctgacaagggttgtaagacgaggtgct
gagaacaccggaatagatgccaatggaaattcgtacgacttgagcacaaaactgctccat
ttggcatggcacccagacgaaaatttaattgcctgtgctgcagccaatagcttgtacatg
tactatgcgtaa
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