Brachypodium distachyon (stiff brome): 100838173
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Entry
100838173 CDS
T01717
Name
(RefSeq) adoMet-dependent rRNA methyltransferase spb1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100838173
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100838173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
100838173
NCBI-ProteinID:
XP_003567865
UniProt:
I1HGA5
LinkDB
All DBs
Position
2:complement(14201325..14206245)
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AA seq
847 aa
AA seq
DB search
MGKAKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARYRFLPTARAVLDLCAAPGGWVQVA
VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRSSIRKLMDSKGVGAFDVVLHDGS
PNVGGAWAQEATTQSALVIDSVRLATMFLAPKGTFVTKVFRSQDYNAIMFCLKQLFEKVE
ATKPTASRSTSAEIYIICQKYKAPAKIQPELLDIKHLFSVDEEKSVPRDITNPGKKKRER
SGYGEGETVLGKAGLASDFIWSEAQTPIEFLGSFGAISFEDPASLPIKNHELTTEEIKHL
CEDLYVLDKNSFKHILKWRIRIRKALSASSQVTPKADGTTLDAKVKDDDQLLQEMEELTS
VIDRKKRREKKRLSRRRAKDKARKATGMQIDATEDGYCDPDLFSIDAIKGGKGLQALEST
ELNVEDSIGDSEDEETQTHEDSDEEMDSDEEQQRYDAQLEEMLDEAYERFVTKKGGEVKQ
ERKRAKRINTDADAELLEGGEDDGDDVDMDQVSDEDQDQDEDTNPLLLSLDTEKPTKEQI
VKQWYSQDVFTEAGAGGLTEQSDSENEREKPRKNLKKMDSGKEMRAKAQMDSGKKEKLAK
AQRSQEDEFEIVRAEPVRTEEDSSSSSDDSDDEPEEDLDDDTKAEVLAYAHKMLRKKQRE
QILDDAYNKYMFDDVGLPKWFVEDEKRHTQPMKPITREEVAAMKAQFREIDARPSKKVAE
AKARKKRVAMKKLEKARQKADIVADQSDINEKSKAKMIDKIYKKAVTTQKPKKEYVVAKK
GVQVRAGKGKVLVDPRMKKDKRTSGLGKKGKGGKGGAKGGKGKKGAAGQRKGGGRGKGGK
KAGKSPH
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggcgaaggggaagcagaggcaggacaagttctaccacctcgccaaggagcaa
gggtaccggagtcgggcggccttcaagctgctgcagctcgacgcgcggtaccgcttcctg
ccgacggcgcgcgccgtgctcgacctgtgcgcggcgcccggcggatgggtccaagtggcc
gtcaaccacgcccccgtaggcgccttcgtcgtcggcgtcgacctcgtgcccatccgcccc
atccgcggcgcgcactccctcacggaggacatcaccaccaccaagtgtcggtcgtccata
cggaagctcatggactccaagggcgtcggggccttcgacgtcgtcctccacgacgggtcg
cccaacgtcggtggcgcgtgggcgcaggaggccaccacgcagtccgcgctcgtcatcgac
tccgtgcgcctcgccaccatgttcctcgcccccaagggcaccttcgtcaccaaggtcttc
aggtctcaagattacaatgctatcatgttctgtctcaaacagctatttgagaaggttgag
gcgactaaaccaacagccagtcgttccacgtctgctgaaatttatattatctgtcagaaa
tataaagcccctgcaaagattcaaccagaacttcttgatataaagcacttgttcagtgtg
gatgaagagaagagcgtgcctagggatataactaatcctggaaagaaaaagagagaacgt
tctgggtatggagaaggagaaacggtattggggaaagctggtctggcatcagattttata
tggtctgaagctcagacaccgatcgagtttcttggttcttttggtgcaatttcatttgaa
gatccagcgtcactacctatcaagaatcatgagcttactactgaggagataaaacacctc
tgtgaggatttatatgtgctagacaaaaatagcttcaagcatatattgaaatggcgtata
cgcataaggaaagcactctcagcatcttctcaagttaccccaaaggctgatggtaccacg
ttggatgccaaggtcaaagatgatgaccaacttttacaggaaatggaagaattgacgagt
gtcattgatagaaagaaaaggagagagaagaaacgtctatcaagacgtcgcgcaaaggat
aaagcacgtaaggcaacaggaatgcaaattgatgctacagaagatggatactgtgatcct
gacctgttttcaattgatgctataaagggtggaaaaggacttcaagctctagagtcaaca
gagcttaatgtggaagatagcattggagacagtgaggatgaagagactcaaactcatgaa
gactctgatgaggaaatggattctgatgaagagcagcaaaggtatgatgctcaactcgag
gaaatgctcgatgaagcttatgagcgttttgtgactaaaaagggcggggaagtaaaacaa
gaacgtaaacgtgccaagagaatcaataccgatgctgatgcagaattgttagagggaggc
gaagatgatggtgatgatgttgacatggatcaagtttctgatgaagatcaagatcaagat
gaagacaccaatccccttctattatctctagatacagagaagccaacaaaagagcagatt
gtaaagcagtggtacagtcaggatgtgttcacagaagcaggggctggcggcctgactgag
cagagtgatagtgaaaatgaaagagagaagccacgtaagaatttgaaaaagatggattca
ggaaaggagatgcgggctaaagcacagatggattcaggaaagaaggagaaactggctaaa
gcacagcgctcgcaagaggatgaatttgagatagtacgagcagaaccagtccggactgaa
gaggactcgtcctcatcttctgatgattcggatgatgaaccagaggaggacctcgatgat
gacacaaaggctgaagtgctagcctatgcacataaaatgttgaggaagaagcagagggag
cagatacttgacgatgcttacaacaagtacatgtttgatgatgtaggattgcctaaatgg
tttgttgaagatgaaaagcgacacacccagcctatgaaacctatcacccgtgaagaagta
gctgccatgaaggcccagtttagggagattgatgcccggccatccaagaaagtagcagag
gctaaagctcggaagaagcgtgttgccatgaagaaactggagaaggcacgccaaaaggca
gacattgtcgcggaccagagtgacataaacgagaagtcaaaggcgaagatgattgacaag
atctacaagaaggcggtgacgacccagaagcctaagaaggagtatgttgttgcaaagaag
ggggttcaggtcagggctggtaagggtaaggtgttggtggatccgcggatgaagaaggac
aagaggaccagcgggttggggaagaaggggaagggcggcaaaggaggcgccaaaggtggc
aaggggaagaagggagctgccggccagaggaaaggaggcgggcgagggaagggtgggaag
aaggcaggcaaatccccgcattga
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