Brachypodium distachyon (stiff brome): 100838271
Help
Entry
100838271 CDS
T01717
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03420
Nucleotide excision repair
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100838271
09124 Replication and repair
03420 Nucleotide excision repair
100838271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bdi03051
]
100838271
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100838271
Proteasome [BR:
bdi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100838271
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100838271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
UBA_RAD5A
Rad60-SLD
Dsc3_N
UBA_3
Rad60-SLD_2
TECR_N
STI1-HOP_DP
Motif
Other DBs
NCBI-GeneID:
100838271
NCBI-ProteinID:
XP_003563980
UniProt:
I1GZ66
LinkDB
All DBs
Position
1:complement(42045298..42051663)
Genome browser
AA seq
413 aa
AA seq
DB search
MKLFVKTLKGTNFEIEASPEASVAEVKRIIEGAQGQNVYPADQQMLIHQGKILKDDTTLE
GNNVAENSFLVIMLSKAKASPSGPSTASKAPTIQAQPATPVAAATPSGPATPVARTPPST
APVSASELAPPSAQPPAGSDIPAAAVTASGDADVYSQAASNLVSGGSLEQTVQHILDMGG
GTWERDMVVRALRAAYNNPERAIDYLYSGIPENVEAPPVARAPAPVQQATNPQALSQAAP
VPPVQPSGVASAGPNANPLNLFPQGVPTGGSNPGAGVGAGAGALDALRALPQFQALLALV
QANPQILQPMLQELGKQNPQILRLIQENQAEFLRLVNETPESGAAGNILGQLAAAMPQAA
VTVTPEERESIQRLEAMGFNRELVLEVFFACNRDEELAANYLLDHGHEYEDQQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttcgtgaagaccctcaagggcacgaacttcgagatcgaggctagccccgag
gcgtcggtggctgaggtcaagagaatcattgaaggtgctcaggggcagaatgtgtaccct
gcggatcagcagatgctcatacatcaaggcaaaattctcaaggatgataccactttggaa
ggcaacaacgttgctgagaacagcttccttgttataatgctgtctaaggctaaggcatca
ccgagtggtccttctactgcttcaaaggcccctactatccaggctcaacctgctactcca
gtggctgctgctactccgtctggccctgctaccccagttgcaagaacaccaccttcaaca
gcacctgtttctgcatctgaactggccccacccagtgcacagcctccagctggttctgat
attccagctgctgcagtaactgcatcaggtgacgctgatgtttacagtcaggctgcatca
aaccttgtctcaggcggcagcctagaacagacagtccaacatattcttgacatgggtggt
ggcacctgggaacgtgatatggttgtccgtgctttacgtgctgcatataacaaccctgag
agagctattgactatctatattctggaatacctgagaatgtagaggctccacctgtggct
cgagcacctgctccagttcaacaggcaacaaacccgcaagctctctctcaggctgcaccc
gtgccaccagtgcagccatcgggtgtcgcctccgcagggcctaatgcaaatcctcttaac
cttttccctcagggtgttccaactggtgggtccaatcctggtgctggtgtgggtgcgggc
gccggtgcccttgatgcactgcgagcgcttccgcagttccaggcactgcttgcattggtc
caggctaatcctcaaatcttacagccaatgcttcaagagctagggaaacaaaatccgcag
atcctgcggttgattcaggaaaatcaggctgagttcctccgcttggtgaatgaaacacct
gagagtggtgctgccggaaatatactaggccaactagcagctgcaatgccacaggcggct
gtgaccgttacccctgaagaacgggagtccatccagcggcttgaggccatgggattcaac
cgtgagcttgtgttggaggtcttctttgcttgcaacagggatgaagagctggctgccaac
taccttttggatcatggccatgagtatgaggatcaacaatag
DBGET
integrated database retrieval system
