KEGG   Brachypodium distachyon (stiff brome): 100838307
Entry
100838307         CDS       T01717                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100838307
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    100838307
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 Prok-RING_4 DEAD ResIII zf-RING_5 zf-RING_4 zf-ANAPC11 zf-Nse
Other DBs
NCBI-GeneID: 100838307
NCBI-ProteinID: XP_003572575
UniProt: I1IA52
LinkDB
Position
3:46421635..46435303
AA seq 1018 aa
MGKEDQVATVRAVLGEGTPEMDIIRALHMAGDDPTKAINILLDFHHKLPAPPLPSPSPSQ
SPPPVKPTNPPVESIPPPKTPSQSKPAADKPRPNPAPTGGGEHWWLVGSAEMAGLSTCKG
RRIAAGDPVTFSFPNSAAAAAPGKGRPGRLALASCTSEIMRFSTPHNGEVGRIPNEWARC
LLPLLKEGKIKVEGQCKSAPEVLSIMDTVLLCASVYINSSMFRDQKQSLPKAARVATDDS
TFHPLPALFKVIGLAPFKKAAFTPEDLYSRKRPIERKSSTGLPATKLTSEKLRLSCGGNE
DDPGEGAVSDSDLDDIIGISDSSALEETAPPDALQCDLRPYQKQALHWMLQLEKGSSSQD
AATTLHPCWEAYKLEDKRELVLYVNVFSGDATTEFPSTLQLARGGILADAMGLGKTIMTI
SLLLSDSSKGLITTHHSTQISREASGLGEIHIKSQNPVKNLASPFSFSKLKKLKTPLVGG
GNLIICPMTLLSQWKAEIEAHTKPNTMNIYVHYGQSRPKEASFIGQNDIVLTTYGVVASE
FSTESSTENGGLYSVHWFRVVLDEAHMIKSSKSLISQAAAALTADRRWCLTGTPIQNNLE
DIYSLFRFLRVEPWRNWALWYKLVQKPFEEGDERGLKLVQTILKRVMLRRTKNSTDKEGR
PILTLPPATIEVKYCDLSEPEKDFYEALFRRSKVKFDQFVEQGKVLHNYASILELLLRLR
QCCDHPFLVMSRGDTQEYADLNKLAKRFLHGGNSVVNGNSSSLPSKAYIEEVVQELQKGE
GECPICLEAFEDAVLTPCAHRLCRECILSSWQSTAAGLCPVCRKSMSKQDLITAPTDSRF
QVDVEKNWIESSKISFLLQELESLRSSGAKSIVFSQWTAFLDLLQIPLSRHGISFARLDG
TLNLQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMR
IHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFS
NT seq 3057 nt   +upstreamnt  +downstreamnt
atggggaaggaggatcaggtggccacggtgcgcgcggtgctcggcgagggtacgccggag
atggacatcatccgcgcgctccacatggccggcgacgaccccaccaaggccatcaacatc
ctcctcgacttccaccacaagctgcctgcgccgcccttgccctcgccgtcgccgtcgcaa
tcgcccccgccggtcaaacccaccaacccccccgtagaatcgatcccgccacccaaaacc
ccttcacagtccaagccggcggcagataaacctaggcccaatcccgcgcccaccggcggc
ggcgagcactggtggctcgtggggagcgccgagatggcggggttatccacctgcaagggc
aggcgcatcgccgccggggaccccgtcaccttctcgttccccaactctgcagccgcagcc
gccccgggcaagggccgtcctggccgcttagccctcgcttcctgcacctcagagattatg
cgcttctcaaccccgcacaatggggaggtgggtcggatccccaatgagtgggcgcggtgt
ttgctaccccttctcaaggagggcaagattaaagttgaaggccagtgcaaatccgctcca
gaggttcttagcatcatggacactgtccttttgtgtgcaagtgtttatataaacagctca
atgttccgtgaccaaaaacaatcattgcccaaggcagcgcgtgtcgctactgacgattcc
acattccatccgctgcctgcacttttcaaggtcattgggcttgccccttttaagaaggca
gcatttactcctgaagatctttattccaggaagcgaccaattgaaagaaagagcagtacc
ggattgccagccacaaagttgacatctgagaaattgagattatcttgtggtggaaatgaa
gatgatcctggtgaaggagctgtttcagattcagatttggatgatataattggaatctca
gacagttctgcactggaggagacggctccccctgacgcactgcagtgtgatctacgccct
tatcagaagcaggccctacattggatgctgcagcttgagaaaggcagttcctctcaggat
gcagctacaacccttcacccttgttgggaggcatataaacttgaggacaagagggagctt
gttctgtacgtgaatgtattttcaggggatgccaccactgagtttcctagcacattacag
cttgctagaggagggattctggcagatgcaatgggactagggaagactattatgacgata
tctcttcttctttctgattctagcaaaggattaatcactactcatcacagtactcagatc
tctagagaagctagtgggttgggtgaaattcatatcaagtctcagaatcctgtgaagaat
cttgctagccctttctcttttagcaagctcaagaaacttaagaccccactggttggaggt
ggcaatctaattatctgcccgatgacactacttagtcaatggaaggctgagattgaagct
cacactaaaccgaatactatgaacatatatgttcattatggccaaagcagaccaaaggaa
gcaagctttattggtcagaatgatattgtgctgaccacctatggtgttgtggcatcagaa
ttttcaaccgagagttctacagaaaacggtggcctctactctgttcattggtttagagtt
gtgcttgatgaggcacacatgataaagtcttctaaaagtttaatatcccaagctgctgct
gctcttactgctgatcggcgttggtgtcttactggtacaccaattcagaacaacttggag
gatatatacagcctttttaggtttctgagggttgaaccatggaggaactgggctctgtgg
tataaacttgtacaaaaaccatttgaagaaggtgatgaaagaggcttaaagctagtgcag
accattttaaagcgagtaatgttgaggagaactaaaaatagcacagacaaggagggcaga
ccaatccttactttaccacctgcgactattgaagtgaaatattgtgatttatcagagcct
gagaaagacttctatgaagctttgtttcgacggtctaaggtgaaatttgatcagtttgtg
gagcaaggaaaggtcctgcataattatgcttccattttggagttgcttttgcgccttagg
cagtgttgtgaccatccatttcttgttatgagtcgtggagatacacaggagtatgcagac
ctcaataagcttgcgaagcgtttcctgcatggtggcaatagtgttgttaatgggaattct
tcttcccttccctctaaggcttacattgaagaggttgtccaagaattacagaaaggcgag
ggggaatgccctatttgcctggaagctttcgaggatgccgtgttaactccctgtgctcac
cgtttatgccgagagtgtattttgtctagttggcagagtacagctgctggtctttgtcct
gtctgtagaaagtcgatgagcaagcaagatcttattactgctccaactgatagtcgcttt
caagttgatgtcgagaagaactggattgaatcttccaagatatcttttcttctacaggaa
ttagaatctctccgcagttcaggtgccaagagtatcgtgtttagccagtggactgcattt
ttggatctcctgcaaattccactttccaggcatggcatctcatttgctagactggatggc
accttaaatcttcagcagagggagaaagtaatcaaggagttttctgaggacaaaagcatt
ttggttttgcttatgtctctgaaagctggtggcgttggaataaaccttactgccgcatct
aatgcatttgtcatggatccttggtggaatcctgctgttgaagaacaagctgtcatgcgc
atccatcgaattggtcaaacaaagagtgtttctatcaaaaggttcattgtcaagggtact
gttgaggaacgaatggaagccgtgcaagctcgtaagcagcgaatgatttctggagcgttg
acagaccaagaagtccgaacggcacgaatagaagaactcaagatgcttttctcttga

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