Brachypodium distachyon (stiff brome): 100838321
Help
Entry
100838321 CDS
T01717
Name
(RefSeq) cryptochrome-1
KO
K12119
cryptochrome 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100838321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF6944
Motif
Other DBs
NCBI-GeneID:
100838321
NCBI-ProteinID:
XP_003575393
UniProt:
I1IBR0
LinkDB
All DBs
Position
3:50339090..50344017
Genome browser
AA seq
637 aa
AA seq
DB search
MGGSERTIVWFRRDLRIDDNPALAAAARDGSVLPIFIWCPADEGQFYPGRCSRWWLKESL
AHLGKSLEALGCPLHLIRAEESSLAALLQCVHSIGATRVVYNHLYDPVSLVRDDNVKNEL
SVLGISFESFNGDLLYQPWEVYDDNGHAFTTFNLYWEQCLKLPIEVSPSLAPWRLVPVPG
IENLQSCSIDDLGLESSKDEESSNALLSRAWSPGWRNAEKTLEEFVCQGLQDYSKHGMKV
AGATTSLLSPYLHYGELSVRKIYQLVRMQQIKWENEGKSEAGESINLFLQSVGLREYSRY
LCFNFPFTHERSLLGNLKHYPWQVDEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIR
VIVSSFAVKFLLIPWTWGMKYFWDVLLDADLESDILGWQYISGSLPDGHELSRLDNPEVQ
GQKYDPDGEYVRTWIPELARMPTEWIHHPWDAPSSILQVAGVELGFNYPKPIVELHTARE
CLDDAISTMWQLDTAEKLAELDGEVVEDNLSHIKSFDIPKVVLKELSPSAPPIDQRVPSS
SGRNHELQPKASKTEDTGSIVNSLISRKRYSSGSAFDVPSCSCSVEVRSQNQDTGCSLVE
SSRYVSHKTERNCADKAEDDDSADSGTSISRPSKKPA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgggcggctcggagaggaccattgtttggttcaggagggacctcaggatcgacgataac
ccggccttggccgccgcagcgagggacggctctgtgctccctatcttcatatggtgccct
gccgacgaagggcagttctatcccggacggtgctcccggtggtggctcaaggagtcgctt
gcccaccttggcaagtcgttggaggcgcttgggtgcccgctccatctgatccgagctgag
gagagctctcttgccgcgcttctgcagtgcgttcattcaatcggcgccactagagtggtt
tataatcatctatatgaccctgtttcacttgtgcgcgatgacaacgtcaagaatgagctt
tcggttcttggaatttctttcgagagtttcaacggtgaccttctgtatcagccatgggaa
gtttatgatgataatgggcatgcatttacaaccttcaatctgtattgggagcagtgcttg
aaattacctatcgaggtgtcgccatctcttgcaccttggaggttggtgccagttccaggt
atagagaatctccaaagttgttcaattgatgatctaggtcttgaatcaagtaaggatgag
gaatcaagcaatgctttgctaagcagggcctggtctcctggctggcgcaacgcagaaaag
acgctagaggagtttgtgtgccaaggtcttcaagattattcaaaacatggaatgaaggtt
gcgggagctacaacctcattgctttcaccatatcttcattatggtgagttgagtgtaagg
aaaatttatcaacttgtcaggatgcaacaaatcaagtgggaaaatgagggaaaatctgaa
gctggggagagcattaacttgttcttgcaatcagttggtcttcgagaatattcacgttac
ttgtgtttcaacttccccttcacacatgaaaggtcgttgctggggaacttgaagcactac
ccatggcaagtagatgaggacaggttcaagtcctggagacagggaatgaccggataccca
ttagtagatgctggcatgagggagctttgggcgactgggtggacacataataggataaga
gtcatcgtttcaagcttcgctgtaaaattcctactaattccatggacctgggggatgaag
tacttttgggatgtgctattggatgctgatctagaaagtgatattcttggttggcagtac
atatctgggagtttgcctgatggccatgagctcagtcgtcttgataatcctgaggttcaa
ggacaaaagtacgacccagatggggaatatgtaagaacttggattccggaactagctaga
atgcccacagaatggatccatcatccctgggatgcaccgagctctatactacaagttgct
ggagttgagctaggctttaactatcctaagcccatagtagaacttcacacggctcgggag
tgcttggatgatgccatctccacaatgtggcaattggatacagctgaaaaacttgcagaa
ttggatggtgaggttgtggaagataacttgagtcatatcaagagttttgacatcccaaaa
gttgttttgaaggaactatctccaagtgctcctcccatcgatcaaagggtgccttcttct
agtggcaggaatcacgagttacagcctaaggcctcaaagacggaagatacaggatctata
gtgaactcactgatatcaagaaaaagatacagtagcgggagtgcctttgatgtcccgtct
tgctcatgttcagttgaagtgcgctcccagaatcaggatactggttgttcgttagttgag
tcttcaagatatgtatcgcataaaacagagagaaactgtgctgataaggcagaagatgac
gacagtgcagatagtggtacaagcatctcaagaccatccaagaaacctgcttag
DBGET
integrated database retrieval system
