Brachypodium distachyon (stiff brome): 100838688
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Entry
100838688 CDS
T01717
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03018
RNA degradation
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100838688
09123 Folding, sorting and degradation
03018 RNA degradation
100838688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100838688
03041 Spliceosome [BR:
bdi03041
]
100838688
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100838688
mRNA degradation factors
5'-3' decay
Lsm complex
100838688
Spliceosome [BR:
bdi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100838688
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF7130
Motif
Other DBs
NCBI-GeneID:
100838688
NCBI-ProteinID:
XP_003567778
UniProt:
I1HFQ8
LinkDB
All DBs
Position
2
Genome browser
AA seq
99 aa
AA seq
DB search
MASAGPTLESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVL
GLYIIRGDNIGVVGEVDEELDAALDMSKLRAQPLKPVIH
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgccggcccgacgctcgaatccctcgtcgaccaggtgatatccgtcatcacc
aacgacggccgcaacatcgtggggactttgaggggattcgaccaagccaccaacatcatt
ctcgacgagtcccatgagagggtctactctaccaaggagggagtacaacagcttgtcctt
ggtctgtacatcatcaggggcgacaacataggtgtggtgggtgaggtcgatgaggagctc
gatgcggcgctggacatgtccaagctgagagcgcagccgctcaagcctgtgatccactga
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integrated database retrieval system