KEGG   Brachypodium distachyon (stiff brome): 100838688
Entry
100838688         CDS       T01717                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03018  RNA degradation
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100838688
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100838688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100838688
   03041 Spliceosome [BR:bdi03041]
    100838688
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100838688
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100838688
Spliceosome [BR:bdi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100838688
SSDB
Motif
Pfam: LSM DUF7130
Other DBs
NCBI-GeneID: 100838688
NCBI-ProteinID: XP_003567778
UniProt: I1HFQ8
LinkDB
Position
2
AA seq 99 aa
MASAGPTLESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVL
GLYIIRGDNIGVVGEVDEELDAALDMSKLRAQPLKPVIH
NT seq 300 nt   +upstreamnt  +downstreamnt
atggcatccgccggcccgacgctcgaatccctcgtcgaccaggtgatatccgtcatcacc
aacgacggccgcaacatcgtggggactttgaggggattcgaccaagccaccaacatcatt
ctcgacgagtcccatgagagggtctactctaccaaggagggagtacaacagcttgtcctt
ggtctgtacatcatcaggggcgacaacataggtgtggtgggtgaggtcgatgaggagctc
gatgcggcgctggacatgtccaagctgagagcgcagccgctcaagcctgtgatccactga

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