KEGG   Brachypodium distachyon (stiff brome): 100838825
Entry
100838825         CDS       T01717                                 
Name
(RefSeq) proliferating cell nuclear antigen isoform X2
  KO
K04802  proliferating cell nuclear antigen
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03030  DNA replication
bdi03410  Base excision repair
bdi03420  Nucleotide excision repair
bdi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100838825
   03410 Base excision repair
    100838825
   03420 Nucleotide excision repair
    100838825
   03430 Mismatch repair
    100838825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdi03032]
    100838825
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100838825
DNA replication proteins [BR:bdi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100838825
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100838825
   MMR (mismatch excision repair)
    Other MMR factors
     100838825
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    100838825
SSDB
Motif
Pfam: PCNA_C PCNA_N STT3_PglB_C
Other DBs
NCBI-GeneID: 100838825
NCBI-ProteinID: XP_003576993
LinkDB
Position
4:45139556..45141561
AA seq 297 aa
MSVQVGSAATKFPTIFEVRLEHATLFKNLVEAISDLFSEAYFNFSSRGLDVLALDSSDIA
LVALLLRAEAINHYHCDRALSVGLSLADMAKAFRCTNNDDTLTIKPVDDRFNILAFKFES
PNGVILDNDFNRVDIEYGPFEINEFPESKYQAIVRMPSAMFMDICNKLSSGERDTVVIIS
VDKERVSFFTGGKTGSSSIVCRPTQTVDKTKELTLIKLKERVSLTFDLRCMNSFSKASTL
SDQVTISLSSIQPTVFEYKIAEMGYIRYYLSPDEMQNDEDDTAKEDKMQNEGDEMQN
NT seq 894 nt   +upstreamnt  +downstreamnt
atgtccgtccaagtggggagcgccgccaccaagttccccaccatttttgaggtgcggctg
gagcacgcgaccctcttcaagaatctcgtggaggcgatcagcgacctgttcagtgaggcc
tacttcaacttctccagcaggggcctcgatgtcctggccctcgacagcagcgacatcgcg
ctcgttgcgctcctcctccgcgccgaggccatcaatcactaccactgcgaccgcgcgctc
tccgtgggcctgagcctcgccgacatggccaaggccttccgctgcaccaacaacgacgac
accctcaccatcaagcccgtcgacgacaggttcaacatacttgccttcaagttcgagtcg
cccaatggtgtgattttggataatgatttcaatcgcgtggacatcgaatacgggcccttc
gaaatcaatgaattcccggaatccaagtaccaggccatagtccgcatgccctctgccatg
tttatggatatctgcaacaagctcagttccggggagagggacactgttgtcatcatctcg
gtggataaggagcgtgtcagcttcttcactgggggaaaaactgggagctcatcaattgtc
tgcaggccgacccaaactgttgacaagacaaaagaacttacccttataaagttgaaagaa
cgggtttccctgacctttgacctgaggtgcatgaactccttctccaaggcgtctaccctg
tctgatcaagtgactatcagcctttcatccatacaacccacagtgttcgagtacaagatc
gcagagatgggctacatcagatattacctgtcgccagatgagatgcagaatgatgaagat
gacactgcaaaggaagataagatgcagaatgagggagatgagatgcagaactga

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