Brachypodium distachyon (stiff brome): 100838988
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Entry
100838988 CDS
T01717
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100838988
Enzymes [BR:
bdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
100838988
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100838988
Prokaryotic type
100838988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
100838988
NCBI-ProteinID:
XP_010232407
UniProt:
A0A0Q3GFW4
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Position
2:complement(50793816..50801922)
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AA seq
729 aa
AA seq
DB search
MRCRHFLNPILSPLSFAKPPSRPLASRGSTVAPPPAQLRAALAEPDVGISRFANSLPGFS
GALKQRYSDFVVHEVARDGTLVRLTSFDLPDERVGAEEEEEEADVDLSHVLESFRLLCGD
ADCDTLRGFLLRVSEGDSNVLPIILSADADKAHRSEVHDFFKRNFMFLVTDTVEHSDGVQ
RCIRVRLRPGPGRRRNAGETGVNRKGMGSSGSSGWRDDRPFDSRSSIAWPYHLGKFLRFH
LYKENKDTQEALRVIGKMLGLQPKSFGFAGTKDKRAITTQQVTLLKVHASRLADLNSKLI
GIKVGDFDYVKERLVLGQLMGNRFTITLRSVVAESEDLIKAAIDGLIKGGFINYYGLQRF
GSASVPNHLIGAALLRGEWESAVNLILDPKEGECDDMNGVREHYEEHGDIDVAIRNFPRR
LIAERAILQRLKKYPGNYLQALMAIPRTLRLMYVHSYQSYLWNHAASMRVGKYGTTQVVE
GDLVYRKECHFGEGTVTDTSEDADGRTNLSEMDISCETVPEETIQSVKITDSEDLLKAIY
KFEDVVLPLPGSETLFPGNEVAGIYHEITKKDGISLTESIHGVKEFSITSMKGGYRRVIQ
RPIDLEWDLVTYTDDKTPLVETDLDVLSKAESLKANEPLSTGVFSCTSQEDSLHTSGATS
LVETKSIGSSDLLPDLLAVKLDFTLPASSYATMAIRELMKTSTSVDHQNSEYIKLLKLQQ
HASFVNLTS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgccgccacttccttaaccccatcctctcccctctctccttcgcaaaacccccc
tcccgtcccctcgccagccgcggaagcaccgtagccccgccacccgcgcagctccgcgcc
gccctggccgagcccgacgtcggcatctcccgcttcgctaattcgctccccggcttcagc
ggcgccctcaagcagaggtactccgacttcgtcgtccacgaggtcgcccgcgacggcacc
ctcgtccgcctcacctccttcgatctccccgacgagcgtgtaggtgcggaggaggaggag
gaggaggccgacgtggacctctcgcatgtgctggagtcgttccggctgctctgcggtgat
gcagactgtgacacattgaggggatttctgttgagggtttcagagggcgatagcaatgtc
ttgccgatcattctctcggctgacgctgataaggctcatcgctcggaggtgcacgacttc
ttcaaaaggaacttcatgttcttggtcacggatactgttgaacacagcgatggggttcag
aggtgtattagggtgcggttgagaccagggccaggtagacggaggaatgctggtgagaca
ggggtgaatcggaagggcatgggcagttctggatcttcaggctggagagatgacaggcca
tttgatagtagatcatctatagcctggccttatcatctcgggaaattccttaggtttcat
ctctacaaggagaacaaggatacacaagaggcactaagagtgataggaaaaatgttaggg
cttcagccaaaatcatttgggtttgctgggacaaaggataaacgtgctattacaacacaa
caggtaacgcttttgaaggtacatgccagtaggttggctgatctaaatagcaaactcatt
ggcattaaagttggagactttgattatgtgaaggagcgccttgttcttggtcaactcatg
ggaaaccgatttacaattactttaaggagtgttgttgcagaatcagaagatttgattaag
gcagctattgatggattgataaaaggtggatttataaattactatggtctgcagcgtttt
ggcagtgcttcagtaccaaatcatctcattggtgctgctttgcttagaggagagtgggaa
agtgctgttaacttgattcttgatccaaaagaaggagagtgtgatgacatgaatggggtg
agggaacattatgaggaacatggtgacatcgacgtggcgattaggaatttccctcggcgt
ctcatagcagagagggctatccttcagcgtttgaagaagtaccctggcaactatctacaa
gcactaatggctatacctagaacattgagattgatgtatgtacatagttaccagagttac
ctatggaaccatgccgcgagtatgagagttggaaagtacggtactacacaagtcgtagaa
ggcgatttggtgtacagaaaagaatgtcattttggggaaggaactgtaactgatacttca
gaagatgctgacggccgtactaatttatctgaaatggacatatcttgtgaaacagtccca
gaagaaacaatccagtccgtcaagataactgactctgaagatttgttgaaggcaatttac
aagtttgaggacgttgtccttcctctgcctggttcagaaacattgtttcctgggaatgaa
gttgctgggatttatcatgaaataactaagaaggatggcattagcctgacagagagcatc
catggggtcaaggagttctccattacaagcatgaaaggaggataccgtcgtgtaatccaa
cgacctattgatcttgaatgggatctcgtgacttacacagatgacaaaacacccttagtc
gaaactgatttagatgttctatccaaagccgagtcactgaaagcaaatgaaccactatct
actggggtgttcagctgcacatcacaagaagattcattgcacacctcaggagcaaccagc
ctagtagagaccaaatctattggcagctcagatctgttaccagatctgctggctgtaaaa
ttagattttactctaccagcatcatcttatgctacaatggctatcagggagctgatgaag
acttcaacttcggttgatcatcagaactcagaatacattaaactcctgaaactacagcaa
catgcatcattcgtgaatctgacctcttaa
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