Brachypodium distachyon (stiff brome): 100839085
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Entry
100839085 CDS
T01717
Name
(RefSeq) RING-H2 finger protein ATL72
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100839085
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100839085
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
100839085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
FANCL_C
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
100839085
NCBI-ProteinID:
XP_003567306
UniProt:
I1HTQ4
LinkDB
All DBs
Position
2:54237661..54238672
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AA seq
200 aa
AA seq
DB search
MERMHARRLLSAAVASTGEQVATAPTPRSASAFSSLDATVITILSLLLCALVVALLLHAL
VRCAFRVTRRACYGQDEEPPGVVETAAPRARKKGGKGGAGAAIRALPTMAYSAETELAVC
GSTECTICLAEFAPGERVRVLPGCSHGFHARCIDRWLSARPTCPTCRRQPFAKPAVPTPA
EEPAPVQLLVNVDAGRPGTI
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaacggatgcacgccaggaggcttctgtcggcggcggtggcgtcgactggggagcag
gtggccacggcgcccacgccgcgctcggcgtcagccttcagctcgctggacgcgacggtg
atcacgatcctgtcgctgctcctctgcgcgctcgtcgtggcgctcctgctccacgcgctc
gtccggtgcgcgttccgcgtcacccggcgcgcgtgctacggccaggacgaggagcccccc
ggggtcgtcgaaacggccgcgccgcgcgcccggaagaagggggggaagggcggcgccggc
gcggccatccgggcgctcccgacgatggcgtactcggcggagaccgagctcgccgtgtgt
ggctccacggagtgcaccatctgcctcgccgagttcgcgccgggcgagcgcgtccgcgtg
ctgccgggttgcagccacggcttccacgcccggtgcattgaccgatggctctccgcgcgg
ccgacgtgccccacctgcaggcggcagccgttcgccaagcccgcggttccgaccccggct
gaggagccggcgcccgtgcagctcctggtgaacgttgacgccggacggcctgggacgatt
taa
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