Brachypodium distachyon (stiff brome): 100839149
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Entry
100839149 CDS
T01717
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100839149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100839149
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100839149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
DEAD
Motif
Other DBs
NCBI-GeneID:
100839149
NCBI-ProteinID:
XP_014758092
UniProt:
I1GQW3
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All DBs
Position
1:complement(13493532..13499989)
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AA seq
1260 aa
AA seq
DB search
MAGKTLKGPSRAAGHPICATPFEAFHHGSWHGVNCIRVQNSRLFVRFVYSGSTVERNIDR
DHLRLRSRRATCFDCSHVLKPGVDVCVQSPHPLQACSTGDQKSSISLCHDARIVTIKRNH
NADQCLCLFLVILDDSQCPGNTEKGGKATDRRQEVVTLNNIFLLQKLQPKELQEGSVQWN
SAEDCLYQNRSRLLSAARFSSEISHLIVLSALRGMEFSIKLVEGNIIYRVIKGDQARRGV
DCMSIPPGFGRNMEIVSFQLHDKNLRPTIRNIPVTHAKKHNLTEDNRFTLKTELDDQLEY
IRVAVKIELDDQLEDQFDVGLLYKHVDLRRSKRLKTQPERFTSYDAPNFNRDTKKKGASA
SSTMHYDHRRASQVKVESSCGEDPVKITGASSFMFNENPSTTKGQHKNTRRRTPCSLPMK
EKPSSVKEESKTEERASDSHIPQTPAQNKEKNHRTPSSFHRKSGTSPCSLGGNYEPAFCQ
KRGRKRKERMCDEEYEKIINQCIGNIQSEMERDYEFNLDVPMMHCCQGAYPEEDFTWPSL
ADSQEEKKDELDELWKEMDFSLTTLELDRMQVPDSEDVHESTARLGKNGEIPCYHDCILD
EELGLMCRLCNVVCIEAKDIFPQMFNGNGYNKDRPGCSNFFHDDHVLDPSLLATFAPEFS
EPRGSGNLWSLIPDLEPKLLPHQKEAFEFIWKNLAGSLQLEEMDNPTASSTGGCVVAHTP
GSGKTLLLISFLVSYLKVHPRSRPLILAPKSAIHTWKREFEKWGISLPLHVLHHADSRGR
SMGAIDPRMQEILSKFHRSSWKNMRFVDCMDKLCKWHASPSVLLMTYSSFLGLTREGSRM
QQRASMVQVLINNPGLLVLDEGHNPRSNKSKLRKMLMKVKTEYRILLSGTVFQNNFEEYF
NTLSLARPRFVDDVMAALVMERKKEMRGRRAKHREAVARRIFVERVAQKMESSSSRDRID
GLNLLNKLTCGFIDSFEGAKLSNLPGIHVYTVFMKPGKIQEEILAKVSMSTSCTGRYPLE
IELLITVGSIHPWLIKTTNCASTFFTSAELDKVDKYKKDFAAGCKAKFVIDLLHKCSFRG
ERVLIFCHNVSPINFLVKLIENVFGWRLGEEVLVLQGDQDLPVRSDVMDKFNSDGEGKRK
VLIASTTACAEGISLTGASRLVMLDSEWNHSKTRQAIARVFRPGQERTVYVYLLVASGTW
EEGKYNRNRRKAWMSKMVFFGRYLDYPLQNAVTAVDDDGVLKELVDEDKTNTFHMIVKQD
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaagacgctcaaggggcctagcagggcagcaggccatcccatttgcgcgacc
ccattcgaggcatttcatcatgggtcatggcatggagttaactgcataagggtacagaac
agccgtctctttgtcagattcgtctactccggatcaaccgtcgagcgtaatatcgacagg
gatcatctacgcttgcgatccagaagggcgacgtgcttcgactgctcgcatgttctcaag
cctggtgttgatgtctgtgtacaatcgccccatccactccaagcatgttcaacaggagat
cagaaatcatctatatcgctgtgtcatgatgcaaggatcgtcacaatcaagagaaatcac
aatgcagatcagtgtctctgcttgtttttggttattctcgacgacagccaatgtcctggt
aatacagaaaaggggggaaaggcaaccgatagaagacaagaggtggtgaccttaaacaat
attttcctcttgcaaaagctccaacctaaggagctccaggagggaagtgtgcaatggaat
tctgcagaggattgcctctatcagaacagaagcaggctgttaagtgctgctagattttcc
tcagaaatctcacatctcatagttttgtctgccctgaggggaatggaattcagtatcaag
ttggtagaaggcaacatcatctatagagtcatcaaaggagaccaagctcgacgcggtgtc
gattgcatgagcatacctccaggatttggcaggaacatggagatagtttcattccaactg
cacgataagaatttacgcccaacgatcagaaatatcccggtcacacatgcaaagaagcac
aatctcacagaagacaacaggttcactctgaagactgagttggatgatcagctggaatac
atcagagtcgctgtgaagattgaattggatgatcaactggaagatcagttcgatgttggg
ctcttgtataagcatgtggatttgaggcgctcaaagcgtctgaaaactcaaccggagcgc
ttcactagttatgatgcgcctaatttcaatcgtgacactaagaagaaaggtgcaagtgca
tcatccaccatgcattatgatcaccgaagagcttcacaagttaaagtagaatcaagctgt
ggagaggatccagtgaagatcactggtgcaagttcattcatgttcaacgaaaacccaagc
accaccaaagggcaacataagaacacaagaaggagaactccatgctctttgcctatgaag
gaaaaacccagctctgtgaaggaggagagcaaaactgaagaaagagcttcagattctcat
attccacagacgccggcacagaataaggagaagaatcatcgcaccccttcatcatttcat
cggaagtctggtacttcaccgtgcagcctaggtggcaattacgaaccagcattttgtcaa
aaaaggggtaggaaaagaaaggaacgcatgtgcgatgaagagtacgagaaaattataaac
caatgcataggaaacatccagagtgaaatggagagggactatgagtttaatctagatgtc
ccgatgatgcattgctgtcagggtgcttacccagaggaggattttacatggccatcgctt
gctgatagccaagaggagaagaaggatgagctcgacgaactgtggaaagaaatggatttc
tcattgaccacactagaacttgatcgaatgcaggttccagattcagaagatgttcacgag
agcactgctcgtttaggaaaaaatggagaaataccatgttatcatgactgcatactggat
gaggagctcggactaatgtgcagattatgcaatgttgtatgtattgaggcaaaggatatt
tttccacaaatgttcaatggcaacggctacaacaaggataggcctggatgcagtaatttt
ttccatgatgatcatgtactcgatccttctcttcttgcaacctttgcaccagaattttca
gaaccgaggggctctgggaacctgtggagtttaatacccgatctggaaccgaagctgctt
cctcaccaaaaggaagcattcgaatttatttggaaaaacttggcaggatcattacagctt
gaggaaatggacaatccaacagccagtagtacagggggctgtgtggttgcacatactcct
gggtccggtaaaacgctgctgctgatatcattccttgtcagttacctgaaggttcaccca
agaagccggccattgatccttgctccaaaatctgctatccatacatggaagagagagttt
gagaaatggggcatttcacttcctctgcatgtgcttcaccatgctgacagtagaggcagg
tcaatgggggctattgatcctagaatgcaggagattctaagtaaatttcaccgatcgtca
tggaaaaacatgcgctttgtggattgtatggacaagttatgcaagtggcatgcgagtcca
agcgttctgctcatgacgtactcctcgttcttaggactgactagagaaggctcaagaatg
cagcagcgagcatccatggtgcaagtcctgatcaacaacccggggctgttggtcctcgac
gagggacacaacccgaggagcaacaagtccaagctgaggaagatgctgatgaaggtgaag
acagagtatagaatcctcttgtcgggtaccgtctttcagaacaattttgaagagtatttc
aacaccctatctttggccaggcctcggtttgtcgatgatgtcatggctgcgcttgtcatg
gagaggaagaaggaaatgagaggcaggagagctaaacacagagaagcagtggccaggcgc
attttcgtggaaagagtcgcacaaaagatggagtctagcagcagtagggaccgaatagat
ggtttgaatttgttaaacaagcttacttgcggatttatcgattcattcgaaggggcaaag
ctaagcaaccttccagggatacatgtgtataccgttttcatgaaacccggtaagattcag
gaagagatactcgcgaaagtctcaatgtctacgtcatgcactggcaggtaccctcttgag
atcgagcttctcatcacggttggttctatacatccatggcttataaaaacaacaaactgt
gctagcactttcttcacttcagcagaattagataaagttgacaagtacaagaaggacttt
gctgctggttgcaaggccaagtttgtcattgatctgctgcacaagtgttcattcaggggg
gagagggttctgatattctgccacaatgtgtccccgataaactttctcgtgaagttgatc
gagaatgtcttcggatggcggctcggggaggaagtcctggtgcttcaaggtgatcaagat
ctgcctgtccgttcggacgtcatggataaattcaacagcgatggtgaaggaaagcggaag
gtgcttattgcttcgacgacagcatgcgccgagggtatcagtttgacaggtgcatcgaga
ttggtcatgctggattcagagtggaaccactccaagaccaggcaggcaatagcacgggtg
ttcaggcctggtcaggagagaaccgtttatgtctaccttctggtggcatctgggacatgg
gaggagggcaagtataacagaaacaggaggaaagcttggatgtcgaaaatggtctttttc
ggacgctatctcgattatccgttacaaaacgccgtgactgctgttgatgatgatggtgtt
ctcaaggagcttgttgatgaagataagaccaatactttccatatgatagtgaagcaggac
tga
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