Brachypodium distachyon (stiff brome): 100839164
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Entry
100839164 CDS
T01717
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100839164
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100839164
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100839164
03036 Chromosome and associated proteins [BR:
bdi03036
]
100839164
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100839164
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100839164
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100839164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
100839164
NCBI-ProteinID:
XP_003561297
UniProt:
I1GPK5
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All DBs
Position
1:9334226..9341341
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AA seq
517 aa
AA seq
DB search
MFNKIIKRGNRKGTRSEGAEPAARPAAPSSSSGGAGAAAPVTVNHASRASAPSPSSPTSP
HVAPSAFPAVPASHTSPPLLEPLPLLRDVAAADRPGLLLRKLRLVAALFDFSDSLKHPRE
KEAKRQALLELVDYVQAPAAAANANAPARLPDNVQEALIAAISVNIFRPLPPAPYESAAA
IDPGATPDDEEEPYLDPAWPHLQLVYELLLRYVVSPDTDTKIAKRYVDHAFVLRLLDHFD
SEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNVFYRFIFETERHNGIGELLEILGSII
NGFALPMKEEHKLFLTRALIPLHKPKSVGIYHQQLSYCIVQFVEKDYKLADAVIRGLLKY
WPVINCQKEVLFLGELEEVLEATQPTEFQRCMVPLFKQIGRCLNSSHFQVAERALFLWNN
DHIVSLIAQNRGVIFPIIFEALERNIQSHWNQAVHGLTANVRKMFLDMDSELFEECQQQY
IEKQAKAKELEEQRESAWRQLEAVAAKAAGDDMVLVN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcatcaagcgcggtaaccgcaaggggacgcgctccgaaggggccgag
cctgccgcgcgccccgcggcgccatcgtcctcgtccggcggcgccggggcggccgcgccc
gtcaccgtcaaccacgcctcacgcgcctccgcgccgtcgccgtcctcgcccacctcgccg
cacgtcgctccctctgccttcccggccgtccccgcgtcccacacctcgccgccgctcctc
gagccgctcccgctcctccgcgacgtcgcggccgctgaccgccccgggctcctcctccgc
aagctacgcctcgtcgccgcgctattcgacttctccgactccctcaagcaccctcgcgag
aaggaggccaagcgccaggcgctcctcgagctcgtcgactacgtccaggcccccgcggcc
gcagccaacgccaacgcgcctgcgcgcctccccgacaacgtccaggaggccctaatcgcc
gccatctccgtcaacatattccgccctctgccccccgcgccgtatgagtctgctgccgcg
attgaccctggtgccaccccggatgatgaggaggaaccctaccttgacccggcttggcca
cacctgcagcttgtctatgagctcctgctccggtacgttgtgtctcctgacacagacact
aagattgctaagcggtatgtggaccacgctttcgtgctccgcctcctcgaccacttcgat
tctgaggacccccgcgaacgtgagtatctcaagactgtgctccaccgcatctatggcaag
ttcatggttcatcgcccgttcatccgcaaggccatcaataatgtgttctatcggttcatc
tttgagaccgagcgccataatggtattggcgagctccttgagattcttggtagcataatc
aatggcttcgctctgcctatgaaggaggagcacaaactgttcctcacccgtgcgctcatc
ccactacacaagcccaagtctgttggtatctaccaccagcagctgtcctactgcattgtc
cagttcgttgagaaggactacaaacttgcagatgctgtgatcaggggcctgctcaagtac
tggccagtcataaattgccagaaggaggtgctgtttttgggggagctcgaggaagtgctc
gaggcgacacaacctacggagttccagcggtgcatggtgccgctgtttaaacagatcgga
cgctgccttaacagttcccatttccaggttgctgagcgggctctgttcttatggaacaat
gatcacattgtaagtttgattgcccaaaatcggggtgttatatttccaataatatttgaa
gcacttgagaggaacatacagagccactggaatcaagctgtccatggtctcaccgcaaat
gtacgcaagatgtttttggacatggacagtgagctatttgaagagtgccaacagcagtac
attgagaaacaagcaaaagccaaagaactggaagagcaacgagagtcggcatggagacaa
ttggaagctgttgctgccaaggctgctggagatgacatggttttggtcaactag
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