KEGG   Brachypodium distachyon (stiff brome): 100839348
Entry
100839348         CDS       T01717                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X2
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bdi04121]
    100839348
Enzymes [BR:bdi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100839348
Ubiquitin system [BR:bdi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100839348
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 zf-RING_10 zf-rbx1 Zn_ribbon_6 RING_XB3-XBAT31 zf-RING_6 Prok-RING_4 zf-RING_4 zf-ANAPC11 Sina_RING zf-Nse TRAF3_RING zf-P11 FYVE
Other DBs
NCBI-GeneID: 100839348
NCBI-ProteinID: XP_003578378
UniProt: I1IRJ1
LinkDB
Position
4:complement(39980573..39984232)
AA seq 197 aa
MSTISGARRASGRQGRSADKVVVNLDMSSQELGSRRGVSTSSTGARTSPIDVEALDDEVQ
AILPSQVPPQRNGRIRRQPVTVVDLEVDASQEGNKRRRVAPVINISPETGEGSSLQSKNA
VKTTKEPAKVAPKEPIFTCPVCWNKLEEPSTTICGHIFCTSCIKQSIQVQKKCPTCRKSL
RMNNFHRIYLPNSVASG
NT seq 594 nt   +upstreamnt  +downstreamnt
atgagtactatcagtggcgcaaggcgtgcctcaggaaggcaaggtaggtctgctgataag
gttgttgtgaacttggacatgagctcccaagagctgggcagccggcgtggggtatcaaca
tcgtccactggtgcacgcacctcacccatcgacgtggaagctctcgatgatgaagtgcag
gccatattgccttcgcaagtgcctcctcagaggaacgggagaataaggaggcagcctgtg
acagtagttgatttagaggtagatgctagccaggaagggaacaaacgtcgaagagttgca
cctgtgataaacatctctccagaaacaggcgaagggtccagcttgcagtcaaaaaatgcg
gtgaaaactaccaaagagcctgcaaaggtggctccgaaggaaccaatatttacctgtcca
gtgtgttggaacaagttggaggagccctccacaacaatatgtggtcatatcttctgcaca
agttgcatcaagcaatccatccaggtccagaagaaatgccctacttgccgaaagagcttg
agaatgaacaatttccaccgtatttaccttccaaactctgttgcttccgggtga

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